Basic Information:

  VIRBase ID:  

VHID00700370

  Virus:  

Human immunodeficiency virus 1 (HIV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hiv1-miR-TAR-5p:  MIMAT0006016          ADAT2:  NM_001286259     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hiv1-miR-TAR-5p	ADAT2
miRBase Accession/Entrez ID	MIMAT0006016	134637
Organism	Human immunodeficiency virus 1 (HIV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	DEADC1//dJ20N2//dJ20N2.1//TAD2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ADAT2	chr6:143770843(-) A-I      intronic chr6:143770842(-) A-I      intronic chr6:143770844(-) A-I      intronic chr6:143770848(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	ADAT2	chr6:143764631(-) T-C intron -    22484847 chr6:143764797(-) T-C intron -    22484847 chr6:143764980(-) T-C intron -    22484847 chr6:143764981(-) C-T intron -    22484847 chr6:143764982(-) A-C intron -    22484847 chr6:143764983(-) A-T intron -    22484847 chr6:143764984(-) T-A intron -    22484847 chr6:143770847(-) A-G intron -    22484847 chr6:143771159(-) A-G intron -    22484847 chr6:143771171(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ADAT2	chr6:143746948-143746949(-) m6A 3'UTR       27773535 chr6:143746967-143746968(-) m6A 3'UTR       27773535 chr6:143747738-143747739(-) m6A 3'UTR       27773535//22608085 chr6:143747757-143747758(-) m6A 3'UTR       27773535//22608085 chr6:143747799-143747800(-) m6A 3'UTR       27773535 chr6:143747846-143747847(-) m6A 3'UTR       27773535 chr6:143747856-143747857(-) m6A 3'UTR       27773535 chr6:143748642-143748643(-) m6A 3'UTR       27773535 chr6:143748705-143748706(-) m6A 3'UTR       27773535//22608085 chr6:143748782-143748783(-) m6A 3'UTR       24981863//27773535//22608085 chr6:143748813-143748814(-) m6A 3'UTR       24981863//27773535//22608085 chr6:143748892-143748893(-) m6A 3'UTR       27773535//22608085 chr6:143748913-143748914(-) m6A 3'UTR       27773535 chr6:143748924-143748925(-) m6A 3'UTR       27773535 chr6:143748971-143748972(-) m6A 3'UTR       27773535 chr6:143749021-143749022(-) m6A 3'UTR       27773535 chr6:143749065-143749066(-) m6A 3'UTR       27773535 chr6:143749092-143749093(-) m6A 3'UTR       27773535//22608085 chr6:143749200-143749201(-) m6A 3'UTR       24981863//27773535//22608085 chr6:143749214-143749215(-) m6A 3'UTR       24981863//27773535//22608085 chr6:143749236-143749237(-) m6A 3'UTR       24981863//27773535//22608085 chr6:143749253-143749254(-) m6A 3'UTR       24981863//27773535//22608085 chr6:143749261-143749262(-) m6A 3'UTR       24981863//27773535//22608085 chr6:143749543-143749544(-) m6A 3'UTR       24981863//22608085 chr6:143749556-143749557(-) m6A 3'UTR       24981863//22608085 chr6:143749580-143749581(-) m6A 3'UTR       24981863//22608085 chr6:143749598-143749599(-) m6A 3'UTR       24981863//22608085 chr6:143749764-143749765(-) m6A CDS       - chr6:143749775-143749776(-) m6A CDS       - chr6:143771731-143771732(-) m6A CDS//exon       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ADAT2	Chromatin K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hiv1-miR-TAR-5p
Interactor2: ADAT2

Evidence Support:

Prediction-Evidence	cRep//miRanda//Targetscan
Support Database	RepTar//VmiReg