Basic Information:

  VIRBase ID:  

VHID00700027

  Virus:  

Human immunodeficiency virus 1 (HIV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hiv1-miR-TAR-5p:  MIMAT0006016          BOD1:  NR_164701     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hiv1-miR-TAR-5p	BOD1
miRBase Accession/Entrez ID	MIMAT0006016	91272
Organism	Human immunodeficiency virus 1 (HIV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	FAM44B

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	BOD1	chr5:173034679-173034680(-) m6A 3'UTR       27773535 chr5:173034696-173034697(-) m6A 3'UTR       27773535 chr5:173034728-173034729(-) m6A 3'UTR       27773535 chr5:173034823-173034824(-) m6A 3'UTR       24284625//25456834//26404942//27773535//22608085 chr5:173034909-173034910(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr5:173034927-173034928(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr5:173034971-173034972(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr5:173034982-173034983(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr5:173034990-173034991(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr5:173035008-173035009(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr5:173035037-173035038(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr5:173035054-173035055(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr5:173035220-173035221(-) m6A 3'UTR//exon       24284625//24209618//24981863//27773535//22608085 chr5:173035284-173035285(-) m6A 3'UTR//CDS//exon       27773535 chr5:173036251-173036252(-) m6A CDS//exon//intron       27773535 chr5:173036272-173036273(-) m6A CDS//exon//intron       27773535 chr5:173036379-173036380(-) m6A CDS//exon//intron       27773535 chr5:173036410-173036411(-) m6A CDS//exon//intron       27773535 chr5:173036471-173036472(-) m6A exon//intron       27773535 chr5:173043478-173043479(-) m1A 5'UTR//exon       26863196//26863410

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	BOD1	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Membrane K562 cells     - Nucleus HCC cell line (HepG2)|HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hiv1-miR-TAR-5p
Interactor2: BOD1

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg