Basic Information:

  VIRBase ID:  

VHID00699886

  Virus:  

Human immunodeficiency virus 1 (HIV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hiv1-miR-TAR-5p:  MIMAT0006016          TTBK1:  NM_032538     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hiv1-miR-TAR-5p	TTBK1
miRBase Accession/Entrez ID	MIMAT0006016	84630
Organism	Human immunodeficiency virus 1 (HIV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	BDTK

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	TTBK1	chr6:43217512(+) A-I      intronic chr6:43217515(+) A-I      intronic chr6:43217535(+) A-I      intronic chr6:43248967(+) A-I      intronic chr6:43224145(+) A-I      intronic chr6:43216340(+) A-I      intronic chr6:43217415(+) A-I      intronic chr6:43220108(+) A-I      intronic chr6:43248951(+) A-I      intronic chr6:43234531(+) A-I      intronic chr6:43216205(+) A-I      intronic chr6:43224093(+) A-I      intronic chr6:43216206(+) A-I      intronic chr6:43216235(+) A-I      intronic chr6:43216381(+) A-I      intronic chr6:43224356(+) A-I      intronic chr6:43224397(+) A-I      intronic chr6:43216277(+) A-I      intronic chr6:43224114(+) A-I      intronic chr6:43224378(+) A-I      intronic chr6:43224370(+) A-I      intronic chr6:43217580(+) A-I      intronic chr6:43231974(+) A-I      intronic chr6:43218234(+) A-I      intronic chr6:43224330(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TTBK1	chr6:43230600-43230601(+) m6A CDS       - chr6:43230762-43230763(+) m6A CDS       25456834//22575960 chr6:43230921-43230922(+) m6A CDS       - chr6:43231039-43231040(+) m6A CDS       - chr6:43231065-43231066(+) m6A CDS       - chr6:43231084-43231085(+) m6A CDS       - chr6:43237390-43237391(+) m6A CDS//intron       - chr6:43250549-43250550(+) m6A CDS       - chr6:43250954-43250955(+) m6A CDS       - chr6:43251033-43251034(+) m6A CDS       25456834 chr6:43251199-43251200(+) m6A CDS       - chr6:43251262-43251263(+) m6A CDS       - chr6:43251286-43251287(+) m6A CDS       - chr6:43251490-43251491(+) m6A CDS       - chr6:43251512-43251513(+) m6A CDS       - chr6:43253689-43253690(+) m6A 3'UTR       25456834 chr6:43253709-43253710(+) m6A 3'UTR       25456834 chr6:43253718-43253719(+) m6A 3'UTR       25456834 chr6:43253781-43253782(+) m6A 3'UTR       25456834 chr6:43254459-43254460(+) m6A 3'UTR       25456834 chr6:43254557-43254558(+) m6A 3'UTR       25456834 chr6:43254579-43254580(+) m6A 3'UTR       25456834 chr6:43254651-43254652(+) m6A 3'UTR       - chr6:43254827-43254828(+) m6A 3'UTR       25456834 chr6:43254843-43254844(+) m6A 3'UTR       25456834 chr6:43254855-43254856(+) m6A 3'UTR       25456834 chr6:43254899-43254900(+) m6A 3'UTR       25456834 chr6:43254910-43254911(+) m6A 3'UTR       25456834 chr6:43254920-43254921(+) m6A 3'UTR       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	TTBK1	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hiv1-miR-TAR-5p
Interactor2: TTBK1

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//Targetscan
Support Database	RepTar//VmiReg