Basic Information:

  VIRBase ID:  

VHID00699690

  Virus:  

Human immunodeficiency virus 1 (HIV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hiv1-miR-TAR-5p:  MIMAT0006016          MYO19:  NM_001163735     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hiv1-miR-TAR-5p	MYO19
miRBase Accession/Entrez ID	MIMAT0006016	80179
Organism	Human immunodeficiency virus 1 (HIV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	MYOHD1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	MYO19	chr17:34875337(-) A-I      intronic chr17:34882934(-) A-I      intronic chr17:34874531(-) A-I      intronic chr17:34874537(-) A-I      intronic chr17:34874550(-) A-I      intronic chr17:34875389(-) A-I      intronic chr17:34885155(-) A-I      intronic chr17:34875334(-) A-I      intronic chr17:34875360(-) A-I      intronic chr17:34875369(-) A-I      intronic chr17:34875376(-) A-I      intronic chr17:34875984(-) A-I      intronic chr17:34875394(-) A-I      intronic chr17:34873789(-) A-I      intronic chr17:34875439(-) A-I      intronic chr17:34882984(-) A-I      intronic chr17:34882978(-) A-I      intronic chr17:34852917(-) A-I      intronic chr17:34882953(-) A-I      intronic chr17:34874563(-) A-I      intronic chr17:34873719(-) A-I      intronic chr17:34884218(-) A-I      intronic chr17:34885067(-) A-I      intronic chr17:34882928(-) A-I      intronic chr17:34875338(-) A-I      intronic chr17:34882736(-) A-I      intronic chr17:34875987(-) A-I      intronic chr17:34875876(-) A-I      intronic chr17:34874208(-) A-I      intronic chr17:34884233(-) A-I      intronic chr17:34884298(-) A-I      intronic chr17:34884301(-) A-I      intronic chr17:34884992(-) A-I      intronic chr17:34885043(-) A-I      intronic chr17:34885083(-) A-I      intronic chr17:34885122(-) A-I      intronic chr17:34885873(-) A-I      intronic chr17:34886385(-) A-I      intronic chr17:34886393(-) A-I      intronic chr17:34886420(-) A-I      intronic chr17:34886656(-) A-I      intronic chr17:34887044(-) A-I      intronic chr17:34886694(-) A-I      intronic chr17:34886854(-) A-I      intronic chr17:34886874(-) A-I      intronic chr17:34873205(-) A-I      intronic chr17:34872505(-) A-I      intronic chr17:34872225(-) A-I      intronic chr17:34868121(-) A-I      intronic chr17:34853710(-) A-I      intronic chr17:34853648(-) A-I      intronic chr17:34853583(-) A-I      intronic chr17:34886886(-) A-I      intronic chr17:34853145(-) A-I      intronic chr17:34886981(-) A-I      intronic chr17:34853143(-) A-I      intronic chr17:34853133(-) A-I      intronic chr17:34853072(-) A-I      intronic chr17:34853017(-) A-I      intronic chr17:34852982(-) A-I      intronic chr17:34887000(-) A-I      intronic chr17:34887036(-) A-I      intronic chr17:34873319(-) A-I      intronic chr17:34873354(-) A-I      intronic chr17:34873359(-) A-I      intronic chr17:34873702(-) A-I      intronic chr17:34873907(-) A-I      intronic chr17:34874155(-) A-I      intronic chr17:34877651(-) A-I      intronic chr17:34877700(-) A-I      intronic chr17:34877723(-) A-I      intronic chr17:34877738(-) A-I      intronic chr17:34877639(-) A-I      intronic chr17:34876050(-) A-I      intronic chr17:34877777(-) A-I      intronic chr17:34876035(-) A-I      intronic chr17:34877780(-) A-I      intronic chr17:34877781(-) A-I      intronic chr17:34877800(-) A-I      intronic chr17:34875859(-) A-I      intronic chr17:34886630(-) A-I      intronic chr17:34875971(-) A-I      intronic chr17:34878972(-) A-I      intronic chr17:34886831(-) A-I      intronic chr17:34886548(-) A-I      intronic chr17:34853561(-) A-I      intronic chr17:34876081(-) A-I      intronic chr17:34874255(-) A-I      intronic chr17:34876097(-) A-I      intronic chr17:34873168(-) A-I      intronic chr17:34874170(-) A-I      intronic chr17:34886629(-) A-I      intronic chr17:34885833(-) A-I      intronic chr17:34884242(-) A-I      intronic chr17:34853010(-) A-I      intronic chr17:34875900(-) A-I      intronic chr17:34886557(-) A-I      intronic chr17:34872463(-) A-I      intronic chr17:34882808(-) A-I      intronic chr17:34872299(-) A-I      intronic chr17:34874251(-) A-I      intronic chr17:34886724(-) A-I      intronic chr17:34868201(-) A-I      intronic chr17:34872310(-) A-I      intronic chr17:34874216(-) A-I      intronic chr17:34872455(-) A-I      intronic chr17:34872378(-) A-I      intronic chr17:34875890(-) A-I      intronic chr17:34873720(-) A-I      intronic chr17:34873793(-) A-I      intronic chr17:34872325(-) A-I      intronic chr17:34882754(-) A-I      intronic chr17:34872434(-) A-I      intronic chr17:34873241(-) A-I      intronic chr17:34864549(-) A-I      intronic chr17:34886130(-) A-I      intronic chr17:34874887(-) A-I      intronic chr17:34885093(-) A-I      intronic chr17:34872374(-) A-I      intronic chr17:34885056(-) A-I      intronic chr17:34886091(-) A-I      intronic chr17:34886060(-) A-I      intronic chr17:34884279(-) A-I      intronic chr17:34874097(-) A-I      intronic chr17:34885772(-) A-I      intronic chr17:34873761(-) A-I      intronic chr17:34885111(-) A-I      intronic chr17:34872342(-) A-I      intronic chr17:34853617(-) A-I      intronic chr17:34875000(-) A-I      intronic chr17:34875983(-) A-I      intronic chr17:34852989(-) A-I      intronic chr17:34886812(-) A-I      intronic chr17:34873815(-) A-I      intronic chr17:34884158(-) A-I      intronic chr17:34864444(-) A-I      intronic chr17:34873740(-) A-I      intronic chr17:34873876(-) A-I      intronic chr17:34876011(-) A-I      intronic chr17:34886589(-) A-I      intronic chr17:34872416(-) A-I      intronic chr17:34873881(-) A-I      intronic chr17:34867933(-) A-I      intronic chr17:34853139(-) A-I      intronic chr17:34875963(-) A-I      intronic chr17:34886969(-) A-I      intronic chr17:34873776(-) A-I      intronic chr17:34885129(-) A-I      intronic chr17:34852971(-) A-I      intronic chr17:34886848(-) A-I      intronic chr17:34887139(-) A-I      intronic chr17:34885780(-) A-I      intronic chr17:34873296(-) A-I      intronic chr17:34876024(-) A-I      intronic chr17:34853567(-) A-I      intronic chr17:34853060(-) A-I      intronic chr17:34886671(-) A-I      intronic chr17:34872418(-) A-I      intronic chr17:34873687(-) A-I      intronic chr17:34873811(-) A-I      intronic chr17:34886061(-) A-I      intronic chr17:34887150(-) A-I      intronic chr17:34885768(-) A-I      intronic chr17:34885827(-) A-I      intronic chr17:34873850(-) A-I      intronic chr17:34878897(-) A-I      intronic chr17:34878935(-) A-I      intronic chr17:34874071(-) A-I      intronic chr17:34885088(-) A-I      intronic chr17:34873675(-) A-I      intronic chr17:34872431(-) A-I      intronic chr17:34853008(-) A-I      intronic chr17:34886464(-) A-I      intronic chr17:34868149(-) A-I      intronic chr17:34874226(-) A-I      intronic chr17:34872381(-) A-I      intronic chr17:34885785(-) A-I      intronic chr17:34886631(-) A-I      intronic chr17:34874229(-) A-I      intronic chr17:34884172(-) A-I      intronic chr17:34867911(-) A-I      intronic chr17:34873767(-) A-I      intronic chr17:34872483(-) A-I      intronic chr17:34887104(-) A-I      intronic chr17:34885102(-) A-I      intronic chr17:34873824(-) A-I      intronic chr17:34885013(-) A-I      intronic chr17:34873711(-) A-I      intronic chr17:34873750(-) A-I      intronic chr17:34873391(-) A-I      intronic chr17:34885854(-) A-I      intronic chr17:34872489(-) A-I      intronic chr17:34876094(-) A-I      intronic chr17:34885849(-) A-I      intronic chr17:34884175(-) A-I      intronic chr17:34886134(-) A-I      intronic chr17:34886648(-) A-I      intronic chr17:34886849(-) A-I      intronic chr17:34878256(-) A-I      intronic chr17:34886412(-) A-I      intronic chr17:34887212(-) A-I      intronic chr17:34885797(-) A-I      intronic chr17:34887114(-) A-I      intronic chr17:34874152(-) A-I      intronic chr17:34875945(-) A-I      intronic chr17:34887077(-) A-I      intronic chr17:34853632(-) A-I      intronic chr17:34886647(-) A-I      intronic chr17:34887144(-) A-I      intronic chr17:34872464(-) A-I      intronic chr17:34853630(-) A-I      intronic chr17:34887061(-) A-I      intronic chr17:34872450(-) A-I      intronic chr17:34872351(-) A-I      intronic chr17:34885059(-) A-I      intronic chr17:34886863(-) A-I      intronic chr17:34886426(-) A-I      intronic chr17:34867920(-) A-I      intronic chr17:34885053(-) A-I      intronic chr17:34875985(-) A-I      intronic chr17:34852929(-) A-I      intronic chr17:34874917(-) A-I      intronic chr17:34874302(-) A-I      intronic chr17:34875400(-) A-I      intronic chr17:34874111(-) A-I      intronic chr17:34872271(-) A-I      intronic chr17:34874478(-) A-I      intronic chr17:34887068(-) A-I      intronic chr17:34875403(-) A-I      intronic chr17:34875395(-) A-I      intronic chr17:34885115(-) A-I      intronic chr17:34878085(-) A-I      intronic chr17:34875401(-) A-I      intronic chr17:34875955(-) A-I      intronic chr17:34886634(-) A-I      intronic chr17:34874523(-) A-I      intronic chr17:34873282(-) A-I      intronic chr17:34874281(-) A-I      intronic chr17:34882785(-) A-I      intronic chr17:34886524(-) A-I      intronic chr17:34886625(-) A-I      intronic chr17:34853684(-) A-I      intronic chr17:34872409(-) A-I      intronic chr17:34874061(-) A-I      intronic chr17:34876080(-) A-I      intronic chr17:34873259(-) A-I      intronic chr17:34873285(-) A-I      intronic chr17:34885834(-) A-I      intronic chr17:34885804(-) A-I      intronic chr17:34886560(-) A-I      intronic chr17:34873770(-) A-I      intronic chr17:34874972(-) A-I      intronic chr17:34867972(-) A-I      intronic chr17:34873688(-) A-I      intronic chr17:34873323(-) A-I      intronic chr17:34872393(-) A-I      intronic chr17:34875935(-) A-I      intronic chr17:34885024(-) A-I      intronic chr17:34876003(-) A-I      intronic chr17:34886628(-) A-I      intronic chr17:34887126(-) A-I      intronic chr17:34872290(-) A-I      intronic chr17:34886558(-) A-I      intronic chr17:34873227(-) A-I      intronic chr17:34853704(-) A-I      intronic chr17:34875981(-) A-I      intronic chr17:34874198(-) A-I      intronic chr17:34882596(-) A-I      intronic chr17:34886645(-) A-I      intronic chr17:34875344(-) A-I      intronic chr17:34885106(-) A-I      intronic chr17:34867986(-) A-I      intronic chr17:34875332(-) A-I      intronic chr17:34875331(-) A-I      intronic chr17:34874190(-) A-I      intronic chr17:34872352(-) A-I      intronic chr17:34885828(-) A-I      intronic chr17:34885119(-) A-I      intronic chr17:34875939(-) A-I      intronic chr17:34886549(-) A-I      intronic chr17:34875339(-) A-I      intronic chr17:34876026(-) A-I      intronic chr17:34873710(-) A-I      intronic chr17:34873188(-) A-I      intronic chr17:34852956(-) A-I      intronic chr17:34873851(-) A-I      intronic chr17:34874947(-) A-I      intronic chr17:34872306(-) A-I      intronic chr17:34875340(-) A-I      intronic chr17:34885744(-) A-I      intronic chr17:34875447(-) A-I      intronic chr17:34886725(-) A-I      intronic chr17:34887058(-) A-I      intronic chr17:34872433(-) A-I      intronic chr17:34878535(-) A-I      intronic chr17:34874590(-) A-I      intronic chr17:34884150(-) A-I      intronic chr17:34873706(-) A-I      intronic chr17:34885099(-) A-I      intronic chr17:34884255(-) A-I      intronic chr17:34886655(-) A-I      intronic chr17:34874471(-) A-I      intronic chr17:34875402(-) A-I      intronic chr17:34886783(-) A-I      intronic chr17:34873267(-) A-I      intronic chr17:34877697(-) A-I      intronic chr17:34885048(-) A-I      intronic chr17:34875359(-) A-I      intronic chr17:34886862(-) A-I      intronic chr17:34886718(-) A-I      intronic chr17:34875368(-) A-I      intronic chr17:34875409(-) A-I      intronic chr17:34875414(-) A-I      intronic chr17:34864440(-) A-I      intronic chr17:34874583(-) A-I      intronic chr17:34866719(-) A-I      Syn:Pro->Pro chr17:34886136(-) A-I      intronic chr17:34873821(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	MYO19	chr17:34885048(-) A-I intron -    15342557 chr17:34885053(-) A-I intron -    15342557   //22327324 chr17:34885059(-) A-I intron -    15342557 chr17:34885088(-) A-I intron -    15342557 chr17:34885099(-) A-I intron -    15342557 chr17:34885102(-) A-I intron -    15342557 chr17:34885106(-) A-I intron -    15342557 chr17:34885111(-) A-I intron -    15342557 chr17:34885115(-) A-I intron -    15342557 chr17:34885744(-) A-I intron -    15342557 chr17:34885772(-) A-I intron -    15342557 chr17:34885785(-) A-I intron -    15342557 chr17:34885797(-) A-I intron -    15342557 chr17:34885804(-) A-I intron -    15342557 chr17:34885827(-) A-I intron -    15342557 chr17:34885828(-) A-I intron -    15342557 chr17:34885833(-) A-I intron -    15342557 chr17:34885834(-) A-I intron -    15342557 chr17:34885849(-) A-I intron -    15342557 chr17:34885854(-) A-I intron -    15342557 chr17:34886060(-) A-I intron -    15342557 chr17:34886130(-) A-I intron -    15342557 chr17:34852989(-) A-I intron -    22327324 chr17:34853008(-) A-I intron -    22327324 chr17:34873241(-) A-I intron -    22327324 chr17:34873710(-) A-I intron -    22327324 chr17:34873767(-) A-I intron -    22327324 chr17:34874478(-) A-I intron -    22327324 chr17:34875340(-) A-I intron -    22327324 chr17:34875400(-) A-I intron -    22327324 chr17:34875403(-) A-I intron -    22327324 chr17:34875414(-) A-I intron -    22327324 chr17:34875339(-) A-G intron -    22484847 chr17:34875340(-) A-G intron -    22484847 chr17:34875368(-) A-G intron -    22484847 chr17:34875395(-) A-G intron -    22484847 chr17:34875400(-) A-G intron -    22484847 chr17:34875401(-) A-G intron -    22484847 chr17:34875402(-) A-G intron -    22484847 chr17:34875403(-) A-G intron -    22484847 chr17:34875409(-) A-G intron -    22484847 chr17:34875414(-) A-G intron -    22484847 chr17:34872351(-) A-G intron -    22484847 chr17:34872352(-) A-G intron -    22484847 chr17:34872393(-) A-G intron -    22484847 chr17:34872418(-) A-G intron -    22484847 chr17:34872434(-) A-G intron -    22484847 chr17:34872450(-) A-G intron -    22484847 chr17:34872489(-) A-G intron -    22484847 chr17:34873241(-) A-G intron -    22484847 chr17:34873710(-) A-G intron -    22484847 chr17:34873761(-) A-G intron -    22484847 chr17:34873767(-) A-G intron -    22484847 chr17:34874198(-) A-G intron -    22484847 chr17:34874216(-) A-G intron -    22484847 chr17:34874281(-) A-G intron -    22484847 chr17:34875963(-) A-G intron -    22484847 chr17:34875971(-) A-G intron -    22484847 chr17:34876080(-) A-G intron -    22484847 chr17:34876094(-) A-G intron -    22484847 chr17:34885048(-) A-G intron -    22484847 chr17:34885053(-) A-G intron -    22484847 chr17:34885088(-) A-G intron -    22484847 chr17:34885111(-) A-G intron -    22484847 chr17:34885115(-) A-G intron -    22484847 chr17:34885119(-) A-G intron -    22484847 chr17:34885785(-) A-G intron -    22484847 chr17:34885849(-) A-G intron -    22484847 chr17:34886130(-) A-G intron -    22484847 chr17:34886647(-) A-G intron -    22484847 chr17:34886648(-) A-G intron -    22484847 chr17:34886848(-) A-G intron -    22484847 chr17:34856539(-) G-T intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	MYO19	chr17:34851482-34851483(-) m6A 3'UTR       27773535 chr17:34851492-34851493(-) m6A 3'UTR       27773535 chr17:34851625-34851626(-) m6A 3'UTR//exon       27773535 chr17:34851667-34851668(-) m6A 3'UTR//exon       27773535 chr17:34851672-34851673(-) m6A 3'UTR//exon       27773535 chr17:34851748-34851749(-) m6A 3'UTR//exon       24284625//24209618//24981863//27773535//22608085 chr17:34851820-34851821(-) m6A 3'UTR//exon       24284625//24209618//24981863//27773535//27371828//22608085 chr17:34851856-34851857(-) m6A 3'UTR//exon       24284625//24209618//24981863//27773535//27371828//22575960//22608085 chr17:34851982-34851983(-) m6A 3'UTR//exon       24284625//24209618//24981863//27773535//27371828//22575960//22608085 chr17:34852013-34852014(-) m6A 3'UTR//exon       24284625//24209618//24981863//27773535//27371828//22575960//22608085 chr17:34852039-34852040(-) m6A 3'UTR//exon       24284625//24209618//24981863//27773535//22575960//22608085 chr17:34852142-34852143(-) m6A 3'UTR//CDS//exon       24284625//24209618//24981863//27773535//22575960//22608085 chr17:34852190-34852191(-) m6A 3'UTR//CDS//exon       24284625//24209618//27773535 chr17:34854146-34854147(-) m6A 3'UTR//CDS//exon       27773535 chr17:34854156-34854157(-) m6A 3'UTR//CDS//exon       27773535 chr17:34854265-34854266(-) m6A 3'UTR//CDS//exon       24981863//27371828 chr17:34854306-34854307(-) m6A 3'UTR//CDS//exon       24981863//27371828 chr17:34854352-34854353(-) m6A 3'UTR//CDS//exon       24981863 chr17:34856934-34856935(-) m6A 3'UTR//CDS//exon//intron       25456834//24981863//22575960//22608085 chr17:34857026-34857027(-) m6A 3'UTR//CDS//exon//intron       22575960 chr17:34857040-34857041(-) m6A 3'UTR//CDS//exon//intron       22575960 chr17:34857170-34857171(-) m6A exon//intron       - chr17:34857184-34857185(-) m6A exon//intron       - chr17:34857211-34857212(-) m6A exon//intron       27773536 chr17:34857250-34857251(-) m6A exon//intron       27773536 chr17:34857269-34857270(-) m6A exon//intron       27773536 chr17:34857307-34857308(-) m6A exon//intron       27773536 chr17:34857317-34857318(-) m6A exon//intron       27773536 chr17:34857341-34857342(-) m6A exon//intron       27773536 chr17:34860056-34860057(-) m6A 3'UTR//exon//intron       27773535 chr17:34860065-34860066(-) m6A 3'UTR//exon//intron       27773535 chr17:34860072-34860073(-) m6A 3'UTR//exon//intron       27773535 chr17:34860120-34860121(-) m6A 3'UTR//exon//intron       - chr17:34860998-34860999(-) m6A 3'UTR//exon//intron       24284625 chr17:34862345-34862346(-) m6A CDS//exon//intron       27773535 chr17:34862356-34862357(-) m6A CDS//exon//intron       27773535 chr17:34862400-34862401(-) m6A CDS//exon//intron       27773535 chr17:34862445-34862446(-) m6A CDS//exon//intron       27773535 chr17:34863301-34863302(-) m6A 3'UTR//CDS//exon//intron       - chr17:34863393-34863394(-) m6A exon//intron       - chr17:34863400-34863401(-) m6A exon//intron       - chr17:34866667-34866668(-) m6A 3'UTR//CDS//exon       24284625 chr17:34866684-34866685(-) m6A 3'UTR//CDS//exon       24284625 chr17:34866755-34866756(-) m6A 3'UTR//CDS//exon       24284625 chr17:34866800-34866801(-) m6A exon//intron       24284625 chr17:34867282-34867283(-) m6A 3'UTR//CDS//exon       27773536 chr17:34868509-34868510(-) m6A 3'UTR//intron       27773536 chr17:34868947-34868948(-) m6A 3'UTR//intron       27773535 chr17:34868983-34868984(-) m6A 3'UTR//intron       24981863//27773535 chr17:34869103-34869104(-) m6A 3'UTR//intron       24284625//25456834//24981863//27773535 chr17:34869165-34869166(-) m6A 3'UTR//intron       24284625//25456834//24981863//27773535 chr17:34869197-34869198(-) m6A 3'UTR//intron       24284625//24981863//27773535 chr17:34869284-34869285(-) m6A 3'UTR//CDS//exon       27773535//27371828//27773536 chr17:34871726-34871727(-) m6A CDS       22575960 chr17:34871740-34871741(-) m6A CDS       22575960 chr17:34890570-34890571(-) m6A 5'UTR//intron       22608085 chr17:34890590-34890591(-) m6A 5'UTR//exon//intron       25456834//22608085 chr17:34890963-34890964(-) m6A 5'UTR//intron       24209618 chr17:34890998-34890999(-) m6A 5'UTR//intron       24209618//25456834//24981863//27371828 chr17:34891026-34891027(-) m6A 5'UTR//intron       24284625//24209618//25456834//24981863//27371828 chr17:34891058-34891059(-) m6A intron       24284625//24209618//25456834//24981863//27371828//22608085 chr17:34891079-34891080(-) m6A intron       24284625//24209618//25456834//24981863//27371828//22608085 chr17:34891120-34891121(-) m6A 5'UTR//exon//intron       24284625//24209618//25456834//24981863//22608085 chr17:34891355-34891356(-) m6A exon//intron       24284625//24209618//25456834//24981863//22608085 chr17:34891366-34891367(-) m6A exon//intron       24284625//24209618//25456834//24981863//22608085 chr17:34891386-34891387(-) m6A exon//intron       24209618//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	MYO19	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)     - Exosome Blood     - Membrane HCC cell line (HepG2)     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     - Ribosome HEK-293 cells     22199352

Interaction Network (The top 100 interactions):

Interactor1: hiv1-miR-TAR-5p
Interactor2: MYO19

Evidence Support:

Prediction-Evidence	cRep//miRanda//Targetscan
Support Database	RepTar//VmiReg