Basic Information:

  VIRBase ID:  

VHID00699601

  Virus:  

Human immunodeficiency virus 1 (HIV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hiv1-miR-TAR-5p:  MIMAT0006016          LIN28A:  NM_024674     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hiv1-miR-TAR-5p	LIN28A
miRBase Accession/Entrez ID	MIMAT0006016	79727
Organism	Human immunodeficiency virus 1 (HIV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CSDD1//LIN-28//lin-28A//LIN28//ZCCHC1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	LIN28A	chr1:26755499(+) A-I      3'UTR chr1:26755495(+) A-I      3'UTR chr1:26755494(+) A-I      3'UTR chr1:26755585(+) A-I      3'UTR chr1:26746528(+) A-I      intronic chr1:26746529(+) A-I      intronic chr1:26746594(+) A-I      intronic chr1:26755644(+) A-I      3'UTR chr1:26755550(+) A-I      3'UTR chr1:26755536(+) A-I      3'UTR chr1:26746958(+) A-I      intronic chr1:26755563(+) A-I      3'UTR chr1:26755578(+) A-I      3'UTR chr1:26755474(+) A-I      3'UTR chr1:26755510(+) A-I      3'UTR chr1:26755212(+) A-I      3'UTR chr1:26755290(+) A-I      3'UTR chr1:26755291(+) A-I      3'UTR chr1:26755303(+) A-I      3'UTR chr1:26755309(+) A-I      3'UTR chr1:26755402(+) A-I      3'UTR chr1:26755455(+) A-I      3'UTR chr1:26755470(+) A-I      3'UTR chr1:26751256(+) A-I      intronic chr1:26755577(+) A-I      3'UTR chr1:26755589(+) A-I      3'UTR chr1:26755614(+) A-I      3'UTR chr1:26755065(+) A-I      3'UTR

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	LIN28A	Cytoplasm Nasopharyngeal carcinoma cells     20498841 Nucleus Nasopharyngeal carcinoma cells     20498841

Interaction Network (The top 100 interactions):

Interactor1: hiv1-miR-TAR-5p
Interactor2: LIN28A

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//Targetscan
Support Database	RepTar//VmiReg