Basic Information:

  VIRBase ID:  

VHID00699160

  Virus:  

Human immunodeficiency virus 1 (HIV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hiv1-miR-TAR-5p:  MIMAT0006016          CEACAM19:  NM_001389722     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hiv1-miR-TAR-5p	CEACAM19
miRBase Accession/Entrez ID	MIMAT0006016	56971
Organism	Human immunodeficiency virus 1 (HIV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CEACM19//CEAL1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	CEACAM19	chr19:45178794(+) A-I      intronic chr19:45178824(+) A-I      intronic chr19:45178829(+) A-I      intronic chr19:45178852(+) A-I      intronic chr19:45179958(+) A-I      intronic chr19:45177802(+) A-I      intronic chr19:45179278(+) A-I      intronic chr19:45182377(+) A-I      intronic chr19:45181210(+) A-I      intronic chr19:45180048(+) A-I      intronic chr19:45183082(+) A-I      intronic chr19:45178832(+) A-I      intronic chr19:45177286(+) A-I      intronic chr19:45179226(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	CEACAM19	chr19:45165544-45165545(+) m6A 5'UTR       24284625//24209618//24981863//26404942//22608085 chr19:45165567-45165568(+) m6A 5'UTR       24284625//24209618//24981863//26404942//22608085 chr19:45165744-45165745(+) m6A intron       24284625//24209618//24981863//26404942 chr19:45165855-45165856(+) m6A intron       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr19:45165886-45165887(+) m6A intron       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr19:45165906-45165907(+) m6A intron       24284625//24209618//24981863//26404942//27773535//22608085 chr19:45166023-45166024(+) m6A intron       24284625//24981863 chr19:45166128-45166129(+) m6A intron       24284625//24209618//24981863//22608085 chr19:45166208-45166209(+) m6A intron       24284625//24209618//24981863//22575960//22608085 chr19:45166222-45166223(+) m6A intron       24284625//24209618//24981863//22575960//22608085 chr19:45166306-45166307(+) m6A intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr19:45166398-45166399(+) m6A intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr19:45166413-45166414(+) m6A intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr19:45166435-45166436(+) m6A intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr19:45166499-45166500(+) m6A intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr19:45166525-45166526(+) m6A intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr19:45166557-45166558(+) m6A intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr19:45166623-45166624(+) m6A intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr19:45166641-45166642(+) m6A intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr19:45166644-45166645(+) Gm intron       - chr19:45166662-45166663(+) m6A intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr19:45166689-45166690(+) m6A intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr19:45166739-45166740(+) m6A intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr19:45166766-45166767(+) m6A intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr19:45169123-45169124(+) m6A intron       - chr19:45169142-45169143(+) m6A intron       - chr19:45169222-45169223(+) m6A intron       - chr19:45169239-45169240(+) m6A intron       - chr19:45169244-45169245(+) m6A intron       - chr19:45169249-45169250(+) m6A intron       - chr19:45169294-45169295(+) m6A intron       - chr19:45169303-45169304(+) m6A intron       - chr19:45169311-45169312(+) m6A intron       - chr19:45169354-45169355(+) m6A intron       - chr19:45169401-45169402(+) m6A intron       - chr19:45170294-45170295(+) m6A 5'UTR//intron       24284625//24981863 chr19:45170311-45170312(+) m6A 5'UTR//intron       24284625//24981863 chr19:45170341-45170342(+) m6A 5'UTR//intron       24981863 chr19:45170477-45170478(+) m6A 5'UTR//intron       24209618//24981863//22608085 chr19:45170485-45170486(+) m6A 5'UTR//intron       24209618//24981863//22608085 chr19:45170543-45170544(+) m6A 5'UTR//intron       24209618//24981863//22608085 chr19:45174580-45174581(+) m6A 5'UTR//intron       24209618//24981863//22608085 chr19:45175948-45175949(+) m6A CDS//exon       24981863 chr19:45175954-45175955(+) m6A CDS//exon       24981863 chr19:45175984-45175985(+) m6A CDS//exon       24981863 chr19:45175996-45175997(+) m6A CDS//exon       24981863 chr19:45176158-45176159(+) m6A CDS//exon       - chr19:45176202-45176203(+) m6A CDS//exon       - chr19:45176217-45176218(+) m6A CDS//exon       - chr19:45177035-45177036(+) m6A exon//intron       - chr19:45181661-45181662(+) m6A exon//intron       27773535 chr19:45182124-45182125(+) m6A CDS//exon       27773535 chr19:45184573-45184574(+) m6A CDS//exon       - chr19:45185878-45185879(+) m6A CDS//exon       - chr19:45186326-45186327(+) m6A exon//intron       27773535 chr19:45186545-45186546(+) m6A exon//intron       27773535 chr19:45186657-45186658(+) m6A exon//intron       27773535 chr19:45186793-45186794(+) m6A 3'UTR//exon       25456834//24981863 chr19:45186832-45186833(+) m6A 3'UTR//exon       25456834//24981863 chr19:45186841-45186842(+) m6A 3'UTR//exon       25456834//24981863 chr19:45186877-45186878(+) m6A 3'UTR//exon       25456834//24981863 chr19:45186889-45186890(+) m6A 3'UTR//exon       25456834//24981863 chr19:45186926-45186927(+) m6A 3'UTR//exon       25456834//24981863 chr19:45186933-45186934(+) m6A 3'UTR//exon       25456834//24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	CEACAM19	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hiv1-miR-TAR-5p
Interactor2: CEACAM19

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg