Basic Information:

  VIRBase ID:  

VHID00697992

  Virus:  

Human immunodeficiency virus 1 (HIV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hiv1-miR-TAR-5p:  MIMAT0006016          ZNF460:  NM_001330622     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hiv1-miR-TAR-5p	ZNF460
miRBase Accession/Entrez ID	MIMAT0006016	10794
Organism	Human immunodeficiency virus 1 (HIV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	HZF8//ZNF272

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ZNF460	chr19:57801829(+) A-I      intronic chr19:57795150(+) A-I      intronic chr19:57801881(+) A-I      intronic chr19:57794148(+) A-I      intronic chr19:57794156(+) A-I      intronic chr19:57795109(+) A-I      intronic chr19:57795144(+) A-I      intronic chr19:57798120(+) A-I      intronic chr19:57798143(+) A-I      intronic chr19:57798153(+) A-I      intronic chr19:57798154(+) A-I      intronic chr19:57799203(+) A-I      intronic chr19:57799207(+) A-I      intronic chr19:57799214(+) A-I      intronic chr19:57801121(+) A-I      intronic chr19:57801284(+) A-I      intronic chr19:57801353(+) A-I      intronic chr19:57801357(+) A-I      intronic chr19:57801428(+) A-I      intronic chr19:57801866(+) A-I      intronic chr19:57801826(+) A-I      intronic chr19:57801347(+) A-I      intronic chr19:57801528(+) A-I      intronic chr19:57801525(+) A-I      intronic chr19:57799226(+) A-I      intronic chr19:57801811(+) A-I      intronic chr19:57801785(+) A-I      intronic chr19:57801620(+) A-I      intronic chr19:57801541(+) A-I      intronic chr19:57794255(+) A-I      intronic chr19:57799657(+) A-I      intronic chr19:57801323(+) A-I      intronic chr19:57794103(+) A-I      intronic chr19:57801739(+) A-I      intronic chr19:57798144(+) A-I      intronic chr19:57794096(+) A-I      intronic chr19:57801763(+) A-I      intronic chr19:57795104(+) A-I      intronic chr19:57794212(+) A-I      intronic chr19:57794274(+) A-I      intronic chr19:57798877(+) A-I      intronic chr19:57794277(+) A-I      intronic chr19:57799307(+) A-I      intronic chr19:57799210(+) A-I      intronic chr19:57799640(+) A-I      intronic chr19:57794743(+) A-I      intronic chr19:57794638(+) A-I      intronic chr19:57801093(+) A-I      intronic chr19:57799594(+) A-I      intronic chr19:57798874(+) A-I      intronic chr19:57799277(+) A-I      intronic chr19:57795079(+) A-I      intronic chr19:57801527(+) A-I      intronic chr19:57799234(+) A-I      intronic chr19:57801294(+) A-I      intronic chr19:57794252(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	ZNF460	chr19:57794277(+) A-I intron -    22327324 chr19:57799640(+) A-I intron -    21960545 chr19:57799656(+) A-I intron -    21960545 chr19:57794277(+) A-G intron -    22484847 chr19:57801270(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ZNF460	chr19:57792086-57792087(+) m6A 5'UTR//intron       24284625 chr19:57792132-57792133(+) m6A 5'UTR//intron       24284625 chr19:57793324-57793325(+) m6A 5'UTR//intron       - chr19:57796020-57796021(+) m6A CDS       24284625//24209618//22575960//22608085 chr19:57802079-57802080(+) m6A CDS       24284625//24209618//22575960//22608085 chr19:57802086-57802087(+) m6A CDS       24284625//24209618//22575960//22608085 chr19:57802142-57802143(+) m6A CDS       24284625//24209618//24981863//22575960//22608085 chr19:57802232-57802233(+) m6A CDS       24284625//24209618//24981863//22575960//22608085 chr19:57802239-57802240(+) m6A CDS       24284625//24209618//24981863//22575960//22608085 chr19:57802243-57802244(+) m6A CDS       25456834//24981863 chr19:57802259-57802260(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr19:57802283-57802284(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr19:57802333-57802334(+) m6A CDS       24284625//24209618//24981863//26404942//22575960//22608085 chr19:57802379-57802380(+) m6A CDS       24284625//24209618//24981863//26404942//22575960//22608085 chr19:57802535-57802536(+) m6A CDS       24284625//24981863//22575960//22608085 chr19:57802603-57802604(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr19:57802641-57802642(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr19:57802686-57802687(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr19:57802826-57802827(+) m6A CDS       24284625//22608085 chr19:57803125-57803126(+) m6A CDS       24284625//24981863//26404942//22608085 chr19:57803286-57803287(+) m6A CDS       24284625//24981863//22575960//22608085 chr19:57803293-57803294(+) m6A CDS       24284625//24981863//22575960//22608085 chr19:57803423-57803424(+) m6A CDS       24284625//24209618//24981863//22575960//22608085 chr19:57803583-57803584(+) m6A CDS       24284625//24209618//24981863//22575960//22608085 chr19:57803611-57803612(+) m6A 3'UTR       24284625//24209618//24981863//22575960//22608085 chr19:57803705-57803706(+) m6A 3'UTR       24284625//24209618//24981863//26404942//22575960//22608085 chr19:57803740-57803741(+) m6A 3'UTR       24284625//24209618//24981863//26404942//22575960//22608085 chr19:57803768-57803769(+) m6A 3'UTR       24284625//24209618//24981863//26404942//22575960//22608085 chr19:57803798-57803799(+) m6A 3'UTR       24284625//24209618//24981863//26404942//22575960//22608085 chr19:57803866-57803867(+) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr19:57803894-57803895(+) m6A 3'UTR       24284625//24981863//26404942//27773535//22575960//22608085 chr19:57803945-57803946(+) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr19:57803953-57803954(+) m6A 3'UTR       24284625//24209618//24981863//22575960//22608085 chr19:57804009-57804010(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr19:57804081-57804082(+) m6A 3'UTR       24284625//24209618//24981863//22575960//22608085 chr19:57804144-57804145(+) m6A 3'UTR       24284625//24209618//24981863//22575960//22608085 chr19:57804163-57804164(+) m6A 3'UTR       24284625//24209618//24981863//22575960//22608085 chr19:57804593-57804594(+) m6A 3'UTR       24981863//27773535//22608085 chr19:57804610-57804611(+) m6A 3'UTR       24981863//27773535//22608085 chr19:57804645-57804646(+) m6A 3'UTR       24981863//27773535//22608085 chr19:57804658-57804659(+) m6A 3'UTR       24981863//27773535//22608085 chr19:57804746-57804747(+) m6A 3'UTR       24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ZNF460	Chromatin K562 cells     - Cytosol HCC cell line (HepG2)|K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hiv1-miR-TAR-5p
Interactor2: ZNF460

Evidence Support:

Prediction-Evidence	cRep//miRanda//Targetscan
Support Database	RepTar//VmiReg