Basic Information:

  VIRBase ID:  

VHID00696111

  Virus:  

Human immunodeficiency virus 1 (HIV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hiv1-miR-TAR-5p:  MIMAT0006016          CD69:  NM_001781     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hiv1-miR-TAR-5p	CD69
miRBase Accession/Entrez ID	MIMAT0006016	969
Organism	Human immunodeficiency virus 1 (HIV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	AIM//BL-AC/P26//CLEC2C//EA1//GP32/28//MLR-3

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	CD69	chr12:9909551(-) A-I      intronic chr12:9909492(-) A-I      intronic chr12:9909419(-) A-I      intronic chr12:9909503(-) A-I      intronic chr12:9911798(-) A-I      intronic chr12:9909567(-) A-I      intronic chr12:9909629(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	CD69	chr12:9909419(-) A-G intron -    22484847 chr12:9909629(-) A-G intron -    22484847 chr12:9911760(-) G-A intron -    22484847 chr12:9911777(-) C-T intron -    22484847 chr12:9911798(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	CD69	chr12:9905265-9905266(-) m6A 3'UTR       26404942 chr12:9905340-9905341(-) m6A 3'UTR       26404942 chr12:9905361-9905362(-) m6A 3'UTR       26404942 chr12:9905373-9905374(-) m6A 3'UTR       26404942 chr12:9905443-9905444(-) m6A 3'UTR       26404942 chr12:9905558-9905559(-) m6A 3'UTR       26404942 chr12:9905573-9905574(-) m6A 3'UTR       26404942 chr12:9905596-9905597(-) m6A 3'UTR       26404942 chr12:9905649-9905650(-) m6A 3'UTR       28052920//26404942 chr12:9905748-9905749(-) m6A 3'UTR       28052920//26404942 chr12:9905928-9905929(-) m6A 3'UTR       28052920//26404942//27773535//27371828 chr12:9905933-9905934(-) m6A 3'UTR       28052920//26404942//27773535//27371828 chr12:9905979-9905980(-) m6A 3'UTR       28052920//26404942//27773535//27371828 chr12:9906036-9906037(-) m6A 3'UTR       26404942 chr12:9906068-9906069(-) m6A 3'UTR       26404942 chr12:9906088-9906089(-) m6A CDS       26404942 chr12:9906143-9906144(-) m6A CDS       26404942 chr12:9913359-9913360(-) m6A CDS//exon       26404942//27371828 chr12:9913384-9913385(-) m6A CDS//exon       26404942//27371828 chr12:9913471-9913472(-) m6A 5'UTR//exon       26404942//27371828 chr12:9913494-9913495(-) m6A 5'UTR//exon       26404942//27371828

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	CD69	Exosome Blood     - Nucleus K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hiv1-miR-TAR-5p
Interactor2: CD69

Evidence Support:

Prediction-Evidence	miRanda//PITA
Support Database	VmiReg