Basic Information:

  VIRBase ID:  

VHID00696071

  Virus:  

Human immunodeficiency virus 1 (HIV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2494

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hiv1-miR-TAR-5p:  MIMAT0006016          CASR:  NM_000388     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hiv1-miR-TAR-5p	CASR
miRBase Accession/Entrez ID	MIMAT0006016	846
Organism	Human immunodeficiency virus 1 (HIV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CAR//EIG8//FHH//FIH//GPRC2A//hCasR//HHC//HHC1//HYPOC1//NSHPT//PCAR1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	CASR	chr3:121911419(+) A-I      intronic chr3:121911440(+) A-I      intronic chr3:121911415(+) A-I      intronic chr3:121911408(+) A-I      intronic chr3:121911464(+) A-I      intronic chr3:121972169(+) A-I      intronic chr3:121985692(+) A-I      intronic chr3:121988782(+) A-I      intronic chr3:121970908(+) A-I      intronic chr3:121937260(+) A-I      intronic chr3:121971116(+) A-I      intronic chr3:121971012(+) A-I      intronic chr3:121970915(+) A-I      intronic chr3:121931511(+) A-I      intronic chr3:121937234(+) A-I      intronic chr3:121936132(+) A-I      intronic chr3:121972312(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	CASR	chr3:121912149(+) C-T intron -    22484847 chr3:121912171(+) C-T intron -    22484847 chr3:121988773(+) C-T intron -    22484847 chr3:121988800(+) T-C intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	CASR	chr3:121980944-121980945(+) m6A CDS       25456834 chr3:121980979-121980980(+) m6A CDS       25456834 chr3:121980993-121980994(+) m6A CDS       25456834 chr3:121981080-121981081(+) m6A CDS       25456834 chr3:121981097-121981098(+) m6A CDS       25456834 chr3:122004052-122004053(+) m6A 3'UTR       - chr3:122004113-122004114(+) m6A 3'UTR       - chr3:122004145-122004146(+) m6A 3'UTR       - chr3:122004351-122004352(+) m6A 3'UTR       - chr3:122004364-122004365(+) m6A 3'UTR       - chr3:122004385-122004386(+) m6A 3'UTR       - chr3:122004394-122004395(+) m6A 3'UTR       - chr3:122004433-122004434(+) m6A 3'UTR       - chr3:122004472-122004473(+) m6A 3'UTR       - chr3:122004528-122004529(+) m6A 3'UTR       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	CASR	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hiv1-miR-TAR-5p
Interactor2: CASR

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg