Basic Information:

  VIRBase ID:  

VHID00695947

  Virus:  

Human immunodeficiency virus 1 (HIV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hiv1-miR-TAR-5p:  MIMAT0006016          ADRA2C:  NM_000683     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hiv1-miR-TAR-5p	ADRA2C
miRBase Accession/Entrez ID	MIMAT0006016	152
Organism	Human immunodeficiency virus 1 (HIV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ADRA2L2//ADRA2RL2//ADRARL2//ALPHA2CAR

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ADRA2C	chr4:3768330-3768331(+) m6A 5'UTR       24209618 chr4:3768592-3768593(+) m6A CDS       24284625//24209618//25456834//24981863//22608085 chr4:3768775-3768776(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr4:3768954-3768955(+) m6A CDS       24284625 chr4:3769746-3769747(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22608085 chr4:3769806-3769807(+) m6A 3'UTR//intron       24284625//25456834//24981863//22608085 chr4:3769911-3769912(+) m6A 3'UTR//CDS       24284625//25456834//24981863//22608085 chr4:3770069-3770070(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr4:3770117-3770118(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr4:3770202-3770203(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr4:3770214-3770215(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr4:3770222-3770223(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr4:3770238-3770239(+) m6A 3'UTR       24284625//25456834//24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ADRA2C	Exosome Blood     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hiv1-miR-TAR-5p
Interactor2: ADRA2C

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg