Detail Information

Basic Information:


  VIRBase ID:  

VHID00695929

  Virus:  

Human immunodeficiency virus 1 (HIV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hiv1-miR-TAR-5p:           ACOX1:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hiv1-miR-TAR-5p ACOX1
miRBase
Accession/Entrez ID		 MIMAT0006016 51
Organism Human immunodeficiency virus 1 (HIV-1) Homo sapiens
Category miRNA mRNA
Alias - ACOX//MITCH//PALMCOX//SCOX

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR ACOX1
chr17:73938330(-) A-I      3'UTR
chr17:73953332(-) A-I      intronic
chr17:73938318(-) A-I      3'UTR
chr17:73940017(-) A-I      3'UTR
chr17:73940022(-) A-I      3'UTR
chr17:73940837(-) A-I      3'UTR
chr17:73964036(-) A-I      intronic
chr17:73940850(-) A-I      3'UTR
chr17:73940848(-) A-I      3'UTR
chr17:73940878(-) A-I      3'UTR
chr17:73940893(-) A-I      3'UTR
chr17:73938290(-) A-I      3'UTR
chr17:73940897(-) A-I      3'UTR
chr17:73940833(-) A-I      3'UTR
chr17:73953335(-) A-I      intronic
chr17:73940040(-) A-I      3'UTR
chr17:73939220(-) A-I      3'UTR
chr17:73973187(-) A-I      intronic
chr17:73973184(-) A-I      intronic
chr17:73973163(-) A-I      intronic
chr17:73964047(-) A-I      intronic
chr17:73964038(-) A-I      intronic
chr17:73939159(-) A-I      3'UTR
chr17:73964000(-) A-I      intronic
chr17:73953375(-) A-I      intronic
chr17:73953338(-) A-I      intronic
chr17:73943929(-) A-I      intronic
chr17:73963418(-) A-I      intronic
chr17:73963431(-) A-I      intronic
chr17:73964328(-) A-I      intronic
chr17:73965353(-) A-I      intronic
chr17:73965385(-) A-I      intronic
chr17:73965386(-) A-I      intronic
chr17:73965401(-) A-I      intronic
chr17:73963301(-) A-I      intronic
chr17:73965422(-) A-I      intronic
chr17:73943167(-) A-I      intronic
chr17:73966000(-) A-I      intronic
chr17:73966111(-) A-I      intronic
chr17:73971325(-) A-I      intronic
chr17:73971378(-) A-I      intronic
chr17:73971512(-) A-I      intronic
chr17:73971854(-) A-I      intronic
chr17:73973112(-) A-I      intronic
chr17:73965440(-) A-I      intronic
chr17:73963426(-) A-I      intronic
chr17:73963450(-) A-I      intronic
chr17:73973113(-) A-I      intronic
chr17:73963307(-) A-I      intronic
chr17:73963308(-) A-I      intronic
chr17:73973141(-) A-I      intronic
chr17:73973203(-) A-I      intronic
chr17:73953326(-) A-I      intronic
chr17:73943164(-) A-I      intronic
chr17:73943154(-) A-I      intronic
chr17:73953290(-) A-I      intronic
chr17:73953264(-) A-I      intronic
chr17:73952687(-) A-I      intronic
chr17:73952686(-) A-I      intronic
chr17:73952606(-) A-I      intronic
chr17:73951239(-) A-I      intronic
chr17:73951223(-) A-I      intronic
chr17:73951222(-) A-I      intronic
chr17:73950482(-) A-I      intronic
chr17:73973304(-) A-I      intronic
chr17:73973498(-) A-I      intronic
chr17:73973565(-) A-I      intronic
chr17:73974340(-) A-I      intronic
chr17:73974345(-) A-I      intronic
chr17:73974379(-) A-I      intronic
chr17:73948544(-) A-I      intronic
chr17:73948495(-) A-I      intronic
chr17:73948438(-) A-I      intronic
chr17:73943065(-) A-I      intronic
chr17:73963387(-) A-I      intronic
chr17:73957803(-) A-I      intronic
chr17:73957778(-) A-I      intronic
chr17:73953357(-) A-I      intronic
chr17:73939250(-) A-I      3'UTR
chr17:73941059(-) A-I      3'UTR
chr17:73940904(-) A-I      3'UTR
chr17:73939245(-) A-I      3'UTR
chr17:73939238(-) A-I      3'UTR
chr17:73939364(-) A-I      3'UTR
chr17:73940069(-) A-I      3'UTR
chr17:73940087(-) A-I      3'UTR
chr17:73940171(-) A-I      3'UTR
chr17:73938286(-) A-I      3'UTR
chr17:73939296(-) A-I      3'UTR
chr17:73938327(-) A-I      3'UTR
chr17:73938365(-) A-I      3'UTR
chr17:73940090(-) A-I      3'UTR
chr17:73938390(-) A-I      3'UTR
chr17:73940191(-) A-I      3'UTR
chr17:73939294(-) A-I      3'UTR
chr17:73938400(-) A-I      3'UTR
chr17:73940196(-) A-I      3'UTR
chr17:73939127(-) A-I      3'UTR
chr17:73939365(-) A-I      3'UTR
chr17:73940268(-) A-I      3'UTR
chr17:73939380(-) A-I      3'UTR
chr17:73939115(-) A-I      3'UTR
chr17:73939477(-) A-I      3'UTR
chr17:73938429(-) A-I      3'UTR
chr17:73940302(-) A-I      3'UTR
chr17:73938448(-) A-I      3'UTR
chr17:73938473(-) A-I      3'UTR
chr17:73939274(-) A-I      3'UTR
chr17:73940972(-) A-I      3'UTR
chr17:73938282(-) A-I      3'UTR
chr17:73938509(-) A-I      3'UTR
chr17:73938507(-) A-I      3'UTR
chr17:73940834(-) A-I      3'UTR
chr17:73940942(-) A-I      3'UTR
chr17:73939158(-) A-I      3'UTR
chr17:73940854(-) A-I      3'UTR
chr17:73940886(-) A-I      3'UTR
chr17:73939066(-) A-I      3'UTR
chr17:73941031(-) A-I      3'UTR
chr17:73941040(-) A-I      3'UTR
chr17:73941095(-) A-I      3'UTR
chr17:73938424(-) A-I      3'UTR
chr17:73971442(-) A-I      intronic
chr17:73970938(-) A-I      intronic
chr17:73971377(-) A-I      intronic
chr17:73963985(-) A-I      intronic
chr17:73963960(-) A-I      intronic
chr17:73943120(-) A-I      intronic
chr17:73970946(-) A-I      intronic
chr17:73943510(-) A-I      intronic
chr17:73971009(-) A-I      intronic
chr17:73974447(-) A-I      intronic
chr17:73963996(-) A-I      intronic
chr17:73964565(-) A-I      intronic
chr17:73943223(-) A-I      intronic
chr17:73973190(-) A-I      intronic
chr17:73961229(-) A-I      intronic
chr17:73950872(-) A-I      intronic
chr17:73948904(-) A-I      intronic
chr17:73965376(-) A-I      intronic
chr17:73973256(-) A-I      intronic
chr17:73961174(-) A-I      intronic
chr17:73961758(-) A-I      intronic
chr17:73953434(-) A-I      intronic
chr17:73973258(-) A-I      intronic
chr17:73949006(-) A-I      intronic
chr17:73963943(-) A-I      intronic
chr17:73964108(-) A-I      intronic
chr17:73974314(-) A-I      intronic
chr17:73948546(-) A-I      intronic
chr17:73943531(-) A-I      intronic
chr17:73940282(-) A-I      3'UTR
chr17:73965450(-) A-I      intronic
chr17:73939150(-) A-I      3'UTR
chr17:73940233(-) A-I      3'UTR
chr17:73940875(-) A-I      3'UTR
chr17:73939195(-) A-I      3'UTR
chr17:73940889(-) A-I      3'UTR
chr17:73938305(-) A-I      3'UTR
chr17:73939139(-) A-I      3'UTR
chr17:73938255(-) A-I      3'UTR
chr17:73940232(-) A-I      3'UTR
chr17:73940067(-) A-I      3'UTR
chr17:73943147(-) A-I      intronic
chr17:73939537(-) A-I      3'UTR
chr17:73943979(-) A-I      intronic
chr17:73964940(-) A-I      intronic
chr17:73950924(-) A-I      intronic
chr17:73973164(-) A-I      intronic
chr17:73939141(-) A-I      3'UTR
chr17:73940988(-) A-I      3'UTR
chr17:73940060(-) A-I      3'UTR
chr17:73941043(-) A-I      3'UTR
chr17:73941122(-) A-I      3'UTR
chr17:73938345(-) A-I      3'UTR
chr17:73941028(-) A-I      3'UTR
chr17:73971434(-) A-I      intronic
chr17:73939058(-) A-I      3'UTR
chr17:73940993(-) A-I      3'UTR
chr17:73973255(-) A-I      intronic
chr17:73939352(-) A-I      3'UTR
chr17:73951400(-) A-I      intronic
chr17:73941004(-) A-I      3'UTR
chr17:73940888(-) A-I      3'UTR
chr17:73940999(-) A-I      3'UTR
chr17:73939269(-) A-I      3'UTR
chr17:73961779(-) A-I      intronic
chr17:73941094(-) A-I      3'UTR
chr17:73964024(-) A-I      intronic
chr17:73953380(-) A-I      intronic
chr17:73938326(-) A-I      3'UTR
chr17:73971380(-) A-I      intronic
chr17:73940980(-) A-I      3'UTR
chr17:73940277(-) A-I      3'UTR
chr17:73941009(-) A-I      3'UTR
chr17:73940068(-) A-I      3'UTR
chr17:73971412(-) A-I      intronic
chr17:73939060(-) A-I      3'UTR
chr17:73941064(-) A-I      3'UTR
chr17:73940969(-) A-I      3'UTR
chr17:73939505(-) A-I      3'UTR
chr17:73971420(-) A-I      intronic
chr17:73939244(-) A-I      3'UTR
chr17:73971431(-) A-I      intronic
chr17:73939275(-) A-I      3'UTR
chr17:73940995(-) A-I      3'UTR
chr17:73941003(-) A-I      3'UTR
chr17:73940994(-) A-I      3'UTR
chr17:73940187(-) A-I      3'UTR
chr17:73940231(-) A-I      3'UTR
chr17:73965285(-) A-I      intronic
chr17:73940077(-) A-I      3'UTR
chr17:73940932(-) A-I      3'UTR
chr17:73971857(-) A-I      intronic
chr17:73961832(-) A-I      intronic
chr17:73941108(-) A-I      3'UTR
chr17:73938412(-) A-I      3'UTR
chr17:73945079(-) A-I      intronic
chr17:73940166(-) A-I      3'UTR
chr17:73963528(-) A-I      intronic
chr17:73966144(-) A-I      intronic
chr17:73973481(-) A-I      intronic
chr17:73961214(-) A-I      intronic
chr17:73970908(-) A-I      intronic
chr17:73952861(-) A-I      intronic
chr17:73939270(-) A-I      3'UTR
chr17:73970857(-) A-I      intronic
chr17:73940146(-) A-I      3'UTR
chr17:73939536(-) A-I      3'UTR
chr17:73940109(-) A-I      3'UTR
chr17:73950781(-) A-I      intronic
chr17:73948860(-) A-I      intronic
chr17:73956854(-) A-I      intronic
chr17:73938428(-) A-I      3'UTR
chr17:73940095(-) A-I      3'UTR
chr17:73940959(-) A-I      3'UTR
chr17:73940906(-) A-I      3'UTR
chr17:73963384(-) A-I      intronic
chr17:73941030(-) A-I      3'UTR
chr17:73971302(-) A-I      intronic
chr17:73971441(-) A-I      intronic
chr17:73940055(-) A-I      3'UTR
chr17:73941000(-) A-I      3'UTR
chr17:73940311(-) A-I      3'UTR
chr17:73941099(-) A-I      3'UTR
chr17:73939495(-) A-I      3'UTR
chr17:73953385(-) A-I      intronic
chr17:73938267(-) A-I      3'UTR
chr17:73941001(-) A-I      3'UTR
chr17:73941005(-) A-I      3'UTR
chr17:73941100(-) A-I      3'UTR
chr17:73973578(-) A-I      intronic
chr17:73940917(-) A-I      3'UTR
chr17:73965380(-) A-I      intronic
chr17:73940129(-) A-I      3'UTR
chr17:73973564(-) A-I      intronic
chr17:73940094(-) A-I      3'UTR
chr17:73943467(-) A-I      intronic
chr17:73951444(-) A-I      intronic
chr17:73940936(-) A-I      3'UTR
chr17:73939207(-) A-I      3'UTR
chr17:73940046(-) A-I      3'UTR
chr17:73948588(-) A-I      intronic
chr17:73948448(-) A-I      intronic
chr17:73963438(-) A-I      intronic
chr17:73963857(-) A-I      intronic
chr17:73973445(-) A-I      intronic
chr17:73963998(-) A-I      intronic
chr17:73964600(-) A-I      intronic
chr17:73943994(-) A-I      intronic
chr17:73950761(-) A-I      intronic
chr17:73943057(-) A-I      intronic
chr17:73964023(-) A-I      intronic
chr17:73948553(-) A-I      intronic
chr17:73971312(-) A-I      intronic
chr17:73948789(-) A-I      intronic
chr17:73973074(-) A-I      intronic
chr17:73950351(-) A-I      intronic
chr17:73952856(-) A-I      intronic
chr17:73963999(-) A-I      intronic
chr17:73943088(-) A-I      intronic
chr17:73963988(-) A-I      intronic
chr17:73948549(-) A-I      intronic
chr17:73946113(-) A-I      intronic
chr17:73949007(-) A-I      intronic
chr17:73964084(-) A-I      intronic
chr17:73973484(-) A-I      intronic
chr17:73959614(-) A-I      intronic
chr17:73953267(-) A-I      intronic
chr17:73973252(-) A-I      intronic
chr17:73953242(-) A-I      intronic
chr17:73973254(-) A-I      intronic
chr17:73966154(-) A-I      intronic
chr17:73973261(-) A-I      intronic
chr17:73948557(-) A-I      intronic
chr17:73943133(-) A-I      intronic
chr17:73959658(-) A-I      intronic
chr17:73963428(-) A-I      intronic
chr17:73953428(-) A-I      intronic
chr17:73939603(-) A-I      3'UTR
chr17:73939183(-) A-I      3'UTR
chr17:73940203(-) A-I      3'UTR
chr17:73940997(-) A-I      3'UTR
chr17:73939261(-) A-I      3'UTR
chr17:73940299(-) A-I      3'UTR
chr17:73940949(-) A-I      3'UTR
chr17:73939079(-) A-I      3'UTR
chr17:73940309(-) A-I      3'UTR
chr17:73940215(-) A-I      3'UTR
chr17:73939078(-) A-I      3'UTR
chr17:73939179(-) A-I      3'UTR
chr17:73940918(-) A-I      3'UTR
chr17:73939212(-) A-I      3'UTR
chr17:73940992(-) A-I      3'UTR
chr17:73941020(-) A-I      3'UTR
chr17:73941045(-) A-I      3'UTR
chr17:73940157(-) A-I      3'UTR
chr17:73940836(-) A-I      3'UTR
chr17:73938454(-) A-I      3'UTR
chr17:73938425(-) A-I      3'UTR
chr17:73941076(-) A-I      3'UTR
chr17:73939185(-) A-I      3'UTR
chr17:73941002(-) A-I      3'UTR
chr17:73940953(-) A-I      3'UTR
chr17:73938268(-) A-I      3'UTR
chr17:73940927(-) A-I      3'UTR
chr17:73940193(-) A-I      3'UTR
chr17:73940167(-) A-I      3'UTR
chr17:73940120(-) A-I      3'UTR
chr17:73940991(-) A-I      3'UTR
chr17:73940440(-) A-I      3'UTR
chr17:73940258(-) A-I      3'UTR
chr17:73939469(-) A-I      3'UTR
chr17:73939399(-) A-I      3'UTR
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED ACOX1
chr17:73940067(-) A-I exon 3'UTR    22327324
chr17:73940077(-) A-I exon 3'UTR    21960545   //22327324
chr17:73940094(-) A-I exon 3'UTR    22327324
chr17:73940120(-) A-I exon 3'UTR    21960545   //22327324
chr17:73940193(-) A-I exon 3'UTR    22327324
chr17:73940307(-) A-I exon 3'UTR    21960545   //22327324
chr17:73940875(-) A-I exon 3'UTR    22028664   //22327324
chr17:73940917(-) A-I exon 3'UTR    22327324
chr17:73940918(-) A-I exon 3'UTR    22028664   //21960545   //22327324
chr17:73940959(-) A-I exon 3'UTR    22028664   //22327324
chr17:73940988(-) A-I exon 3'UTR    22028664   //22327324
chr17:73941099(-) A-I exon 3'UTR    22028664   //22327324
chr17:73940888(-) A-I exon 3'UTR    22028664   //21960545
chr17:73940889(-) A-I exon 3'UTR    22028664   //21960545
chr17:73940906(-) A-I exon 3'UTR    22028664
chr17:73940932(-) A-I exon 3'UTR    22028664
chr17:73940936(-) A-I exon 3'UTR    22028664
chr17:73940969(-) A-I exon 3'UTR    22028664
chr17:73940994(-) A-I exon 3'UTR    22028664
chr17:73940997(-) A-I exon 3'UTR    22028664
chr17:73941001(-) A-I exon 3'UTR    22028664
chr17:73941003(-) A-I exon 3'UTR    22028664
chr17:73941004(-) A-I exon 3'UTR    22028664
chr17:73941009(-) A-I exon 3'UTR    22028664
chr17:73941030(-) A-I exon 3'UTR    22028664
chr17:73941064(-) A-I exon 3'UTR    22028664
chr17:73941076(-) A-I exon 3'UTR    22028664   //21960545
chr17:73941094(-) A-I exon 3'UTR    22028664
chr17:73941100(-) A-I exon 3'UTR    22028664
chr17:73940166(-) A-I exon 3'UTR    21960545
chr17:73940167(-) A-I exon 3'UTR    21960545
chr17:73940187(-) A-I exon 3'UTR    21960545
chr17:73940231(-) A-I exon 3'UTR    21960545
chr17:73940232(-) A-I exon 3'UTR    21960545
chr17:73941122(-) A-I exon 3'UTR    21960545
chr17:73940307(-) A-G exon 3'UTR    21725310
chr17:73940875(-) A-G exon 3'UTR    21725310   //22484847
chr17:73939212(-) A-G exon 3'UTR    22484847
chr17:73939399(-) A-G exon 3'UTR    22484847
chr17:73940094(-) A-G exon 3'UTR    22484847
chr17:73940109(-) A-G exon 3'UTR    22484847
chr17:73940120(-) A-G exon 3'UTR    22484847
chr17:73940157(-) A-G exon 3'UTR    22484847
chr17:73940187(-) A-G exon 3'UTR    22484847
chr17:73940193(-) A-G exon 3'UTR    22484847
chr17:73940231(-) A-G exon 3'UTR    22484847
chr17:73940232(-) A-G exon 3'UTR    22484847
chr17:73940233(-) A-G exon 3'UTR    22484847
chr17:73940888(-) A-G exon 3'UTR    22484847
chr17:73940889(-) A-G exon 3'UTR    22484847
chr17:73940917(-) A-G exon 3'UTR    22484847
chr17:73940918(-) A-G exon 3'UTR    22484847
chr17:73940932(-) A-G exon 3'UTR    22484847
chr17:73940959(-) A-G exon 3'UTR    22484847
chr17:73940988(-) A-G exon 3'UTR    22484847
chr17:73940992(-) A-G exon 3'UTR    22484847
chr17:73941001(-) A-G exon 3'UTR    22484847
chr17:73941002(-) A-G exon 3'UTR    22484847
chr17:73941030(-) A-G exon 3'UTR    22484847
chr17:73941064(-) A-G exon 3'UTR    22484847
chr17:73941076(-) A-G exon 3'UTR    22484847
chr17:73941094(-) A-G exon 3'UTR    22484847
chr17:73941099(-) A-G exon 3'UTR    22484847
chr17:73941100(-) A-G exon 3'UTR    22484847
chr17:73941108(-) A-G exon 3'UTR    22484847
chr17:73941122(-) A-G exon 3'UTR    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ACOX1
chr17:73938971-73938972(-) m6A 3'UTR//CDS//exon       27773535
chr17:73940686-73940687(-) m6A 3'UTR//intron       27773535
chr17:73940773-73940774(-) m6A 3'UTR//intron       27773535
chr17:73942618-73942619(-) m6A 3'UTR//intron       24981863
chr17:73942627-73942628(-) m6A 3'UTR//intron       24981863
chr17:73942689-73942690(-) m6A 3'UTR//intron       24981863
chr17:73974728-73974729(-) m6A 3'UTR//CDS//exon       27371828//27773536
chr17:73974734-73974735(-) m6A 3'UTR//CDS//exon       27371828//27773536
chr17:73974749-73974750(-) m6A 3'UTR//CDS//exon       27371828//27773536
chr17:73974770-73974771(-) m6A 3'UTR//CDS//exon       27371828//27773536
chr17:73974911-73974912(-) m6A 3'UTR//intron       27371828//27773536
chr17:73974927-73974928(-) m6A 3'UTR//intron       27371828//27773536
chr17:73975266-73975267(-) m6A 5'UTR       25456834//27371828//27773536
chr17:73975364-73975365(-) m6A 5'UTR       24284625//25456834//24981863//27371828//27773536

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ACOX1
Chromatin K562 cells     -
Cytoplasm Nasopharyngeal carcinoma cells     20498841
Cytoplasm Nasopharyngeal carcinoma cells     20498841
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Cytosol HCC cell line (HepG2)     -
Exosome Blood     -
Membrane K562 cells     -
Nucleolus K562 cells     -
Nucleus Nasopharyngeal carcinoma cells     20498841
Nucleus Nasopharyngeal carcinoma cells     20498841
Nucleus Colon cancer cells     24393600
Nucleus HCC cell line (HepG2)     -
Ribosome HEK-293 cells     22199352

Interaction Network (The top 100 interactions):


Interactor1: hiv1-miR-TAR-5p
Interactor2: ACOX1

Evidence Support:


Prediction-Evidence miRanda//Targetscan
Support Database VmiReg

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