Basic Information:

  VIRBase ID:  

VHID00695917

  Virus:  

Human immunodeficiency virus 1 (HIV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hiv1-miR-TAR-5p:  MIMAT0006016          AAMP:  NM_001087     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hiv1-miR-TAR-5p	AAMP
miRBase Accession/Entrez ID	MIMAT0006016	14
Organism	Human immunodeficiency virus 1 (HIV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	AAMP	chr2:219133837(-) A-I      intronic chr2:219132757(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	AAMP	chr2:219132757(-) A-G intron -    22484847 chr2:219132766(-) T-C intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	AAMP	chr2:219129208-219129209(-) m6A 3'UTR//exon       27773535 chr2:219130821-219130822(-) m6A CDS//exon       27773535//27773536 chr2:219130837-219130838(-) m6A CDS//exon       27773535//27773536 chr2:219130996-219130997(-) m6A exon//intron       27773536 chr2:219131216-219131217(-) m6A CDS//exon       27371828//27773536 chr2:219131612-219131613(-) m6A CDS//exon       27773535//22575960 chr2:219131645-219131646(-) m6A CDS//exon       27773535//22575960 chr2:219131699-219131700(-) m6A CDS//exon       27773535//22575960 chr2:219132303-219132304(-) m6A CDS//exon       26404942//27773535 chr2:219132311-219132312(-) m6A CDS//exon       26404942//27773535 chr2:219134174-219134175(-) m6A CDS//exon       24981863//27773535//27371828//22575960 chr2:219134214-219134215(-) Am CDS//exon       - chr2:219134214-219134215(-) m1A CDS//exon       26863196 chr2:219134226-219134227(-) m6A CDS//exon       24981863//27773535//27371828 chr2:219134386-219134387(-) m6A 5'UTR//intron       24981863 chr2:219134693-219134694(-) m6A CDS//exon       24981863//27773535 chr2:219134713-219134714(-) m6A CDS//exon       24981863//27773535//27371828 chr2:219134757-219134758(-) m6A CDS//exon       25456834//24981863//27773535//27371828

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	AAMP	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)     - Exosome Blood     - Insoluble cytoplasm K562 cells     - Membrane HCC cell line (HepG2)     - Nucleus HeLa-S3 cells|K562 cells     - Ribosome HEK-293 cells     22199352 Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hiv1-miR-TAR-5p
Interactor2: AAMP

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid
Support Database	VmiReg