Detail Information

Basic Information:


  VIRBase ID:  

VHID00695846

  Virus:  

Human immunodeficiency virus 1 (HIV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hiv1-miR-H1:           ARHGEF33:      

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Interactor Information:


Interactor1 Interactor2
Symbol hiv1-miR-H1 ARHGEF33
miRBase
Accession/Entrez ID
MIMAT0004480 100271715
Organism Human immunodeficiency virus 1 (HIV-1) Homo sapiens
Category miRNA mRNA
Alias - -

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR ARHGEF33
chr2:39131661(+) A-I      intronic
chr2:39133914(+) A-I      intronic
chr2:39131744(+) A-I      intronic
chr2:39144806(+) A-I      intronic
chr2:39142652(+) A-I      intronic
chr2:39182984(+) A-I      intronic
chr2:39121391(+) A-I      intronic
chr2:39134095(+) A-I      intronic
chr2:39169575(+) A-I      intronic
chr2:39135268(+) A-I      intronic
chr2:39144890(+) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ARHGEF33
chr2:39186601-39186602(+) m6A exon//intron       25456834

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hiv1-miR-H1
Exosome Jurkat-derived T cell line (J77cl20)     21505438
ARHGEF33
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hiv1-miR-H1
Interactor2: ARHGEF33

Evidence Support:


Prediction-Evidence RNAHybrid//Targetscan
Support Database VmiReg

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