Detail Information

Basic Information:


  VIRBase ID:  

VHID00695430

  Virus:  

Human immunodeficiency virus 1 (HIV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hiv1-miR-H1:           NCCRP1:      

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Interactor Information:


Interactor1 Interactor2
Symbol hiv1-miR-H1 NCCRP1
miRBase
Accession/Entrez ID
MIMAT0004480 342897
Organism Human immunodeficiency virus 1 (HIV-1) Homo sapiens
Category miRNA mRNA
Alias - FBXO50//NCCRP-1

RNA Editing:


Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED NCCRP1
chr19:39691977(+) A-I intron -    21960545

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase NCCRP1
chr19:39691512-39691513(+) m6A 3'UTR       22575960
chr19:39691539-39691540(+) m6A 3'UTR       22575960

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hiv1-miR-H1
Exosome Jurkat-derived T cell line (J77cl20)     21505438
NCCRP1
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hiv1-miR-H1
Interactor2: NCCRP1

Evidence Support:


Prediction-Evidence cRep//miRanda//RNAHybrid//Targetscan
Support Database RepTar//VmiReg

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