Basic Information:

  VIRBase ID:  

VHID00695382

  Virus:  

Human immunodeficiency virus 1 (HIV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2494

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hiv1-miR-H1:  MIMAT0004480          VSX2:  NM_182894     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hiv1-miR-H1	VSX2
miRBase Accession/Entrez ID	MIMAT0004480	338917
Organism	Human immunodeficiency virus 1 (HIV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CHX10//HOX10//MCOP2//MCOPCB3//RET1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	VSX2	chr14:74716209(+) A-I      intronic chr14:74717451(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	VSX2	chr14:74706180-74706181(+) m6A 5'UTR       25456834 chr14:74706230-74706231(+) m6A 5'UTR       25456834 chr14:74706256-74706257(+) m6A 5'UTR       25456834 chr14:74706309-74706310(+) m6A CDS       25456834 chr14:74727435-74727436(+) m6A CDS       25456834 chr14:74727446-74727447(+) m6A CDS       25456834 chr14:74727502-74727503(+) m6A CDS       25456834 chr14:74727518-74727519(+) m6A CDS       25456834 chr14:74727572-74727573(+) m6A CDS       25456834 chr14:74727611-74727612(+) m6A CDS       25456834 chr14:74727654-74727655(+) m6A 3'UTR       25456834 chr14:74727711-74727712(+) m6A 3'UTR       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hiv1-miR-H1	Exosome Jurkat-derived T cell line (J77cl20)     21505438
	VSX2	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hiv1-miR-H1
Interactor2: VSX2

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg