Basic Information:

  VIRBase ID:  

VHID00695225

  Virus:  

Human immunodeficiency virus 1 (HIV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hiv1-miR-H1:  MIMAT0004480          NPAS4:  NM_001318804     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hiv1-miR-H1	NPAS4
miRBase Accession/Entrez ID	MIMAT0004480	266743
Organism	Human immunodeficiency virus 1 (HIV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	bHLHe79//Le-PAS//NXF//PASD10

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	NPAS4	chr11:66192300-66192301(+) m6A 3'UTR//CDS       25456834 chr11:66192334-66192335(+) m6A 3'UTR//CDS       25456834 chr11:66192352-66192353(+) m6A 3'UTR//CDS       25456834 chr11:66192366-66192367(+) m6A 3'UTR//CDS       25456834 chr11:66192414-66192415(+) m6A 3'UTR//CDS       25456834 chr11:66192421-66192422(+) m6A 3'UTR//CDS       25456834 chr11:66192444-66192445(+) m6A 3'UTR//CDS       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hiv1-miR-H1	Exosome Jurkat-derived T cell line (J77cl20)     21505438

Interaction Network (The top 100 interactions):

Interactor1: hiv1-miR-H1
Interactor2: NPAS4

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid
Support Database	VmiReg