Basic Information:

  VIRBase ID:  

VHID00695080

  Virus:  

Human immunodeficiency virus 1 (HIV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hiv1-miR-H1:  MIMAT0004480          ZCCHC24:  NM_153367     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hiv1-miR-H1	ZCCHC24
miRBase Accession/Entrez ID	MIMAT0004480	219654
Organism	Human immunodeficiency virus 1 (HIV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	C10orf56//Z3CXXC8

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ZCCHC24	chr10:81192477(-) A-I      NonSyn:Tyr->Cys chr10:81148155(-) A-I      intronic chr10:81183611(-) A-I      intronic chr10:81183231(-) A-I      intronic chr10:81183255(-) A-I      intronic chr10:81183650(-) A-I      intronic chr10:81196892(-) A-I      intronic chr10:81199505(-) A-I      intronic chr10:81180477(-) A-I      intronic chr10:81183224(-) A-I      intronic chr10:81181520(-) A-I      intronic chr10:81183582(-) A-I      intronic chr10:81181578(-) A-I      intronic chr10:81181564(-) A-I      intronic chr10:81181523(-) A-I      intronic chr10:81181627(-) A-I      intronic chr10:81183556(-) A-I      intronic chr10:81183662(-) A-I      intronic chr10:81182012(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ZCCHC24	chr10:81142095-81142096(-) m6A 3'UTR       24981863//27773535//22608085 chr10:81142499-81142500(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085 chr10:81142550-81142551(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085 chr10:81144885-81144886(-) m6A 3'UTR       27773535 chr10:81145475-81145476(-) m6A 3'UTR       27773535 chr10:81145532-81145533(-) m6A 3'UTR       24284625//27773535 chr10:81145571-81145572(-) m6A 3'UTR       24284625//24209618//27773535 chr10:81145601-81145602(-) m6A 3'UTR       24284625//24209618//27773535//22608085 chr10:81145676-81145677(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085 chr10:81145705-81145706(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085 chr10:81145715-81145716(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085 chr10:81145841-81145842(-) m6A 3'UTR       24284625//24209618//24981863 chr10:81146211-81146212(-) m6A CDS       - chr10:81154095-81154096(-) m6A CDS       - chr10:81192323-81192324(-) m6A CDS       24284625 chr10:81192337-81192338(-) m6A CDS       24284625 chr10:81192419-81192420(-) m6A CDS       - chr10:81205107-81205108(-) m6A CDS       27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hiv1-miR-H1	Exosome Jurkat-derived T cell line (J77cl20)     21505438
	ZCCHC24	Chromatin K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hiv1-miR-H1
Interactor2: ZCCHC24

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA
Support Database	RepTar//VmiReg