Basic Information:

  VIRBase ID:  

VHID00694536

  Virus:  

Human immunodeficiency virus 1 (HIV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2494

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hiv1-miR-H1:  MIMAT0004480          TPRG1L:  NM_182752     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hiv1-miR-H1	TPRG1L
miRBase Accession/Entrez ID	MIMAT0004480	127262
Organism	Human immunodeficiency virus 1 (HIV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	FAM79A//h-mover//mover

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	TPRG1L	chr1:3543269(+) A-I      intronic chr1:3543217(+) A-I      intronic chr1:3543317(+) A-I      intronic chr1:3543597(+) A-I      intronic chr1:3543710(+) A-I      intronic chr1:3543794(+) A-I      intronic chr1:3543713(+) A-I      intronic chr1:3543167(+) A-I      intronic chr1:3543799(+) A-I      intronic chr1:3543243(+) A-I      intronic chr1:3543619(+) A-I      intronic chr1:3543795(+) A-I      intronic chr1:3543620(+) A-I      intronic chr1:3543405(+) A-I      intronic chr1:3543236(+) A-I      intronic chr1:3543378(+) A-I      intronic chr1:3543417(+) A-I      intronic chr1:3543714(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	TPRG1L	chr1:3543236(+) A-G intron -    22484847 chr1:3543243(+) A-G intron -    22484847 chr1:3543378(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TPRG1L	chr1:3541652-3541653(+) m6A CDS       24209618 chr1:3541661-3541662(+) m6A CDS       24209618 chr1:3541768-3541769(+) m6A CDS       24209618 chr1:3542290-3542291(+) m6A CDS//intron       24209618 chr1:3544095-3544096(+) m6A CDS       - chr1:3544122-3544123(+) m6A CDS       - chr1:3544171-3544172(+) m6A CDS       - chr1:3544199-3544200(+) m6A CDS       - chr1:3545247-3545248(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr1:3545372-3545373(+) m6A 3'UTR       24284625//24209618//24981863//26404942//22608085 chr1:3545394-3545395(+) m6A 3'UTR       24284625//24209618//24981863//26404942//22608085 chr1:3545408-3545409(+) m6A 3'UTR       24284625//24209618//24981863//26404942//22608085 chr1:3545528-3545529(+) m6A 3'UTR       24284625//22608085 chr1:3545544-3545545(+) Y 3'UTR       26075521 chr1:3545569-3545570(+) m6A 3'UTR       24284625 chr1:3546113-3546114(+) m6A 3'UTR       24981863 chr1:3546128-3546129(+) m6A 3'UTR       24981863 chr1:3546280-3546281(+) m6A 3'UTR       24209618 chr1:3546345-3546346(+) m6A 3'UTR       24209618 chr1:3546352-3546353(+) m6A 3'UTR       24209618 chr1:3546375-3546376(+) m6A 3'UTR       24209618 chr1:3546418-3546419(+) m6A 3'UTR       24209618//22608085 chr1:3546515-3546516(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr1:3546601-3546602(+) m6A 3'UTR       24209618//25456834//24981863//22608085 chr1:3546625-3546626(+) m6A 3'UTR       24209618//25456834//24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hiv1-miR-H1	Exosome Jurkat-derived T cell line (J77cl20)     21505438
	TPRG1L	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleus K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hiv1-miR-H1
Interactor2: TPRG1L

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg