Basic Information:

  VIRBase ID:  

VHID00694519

  Virus:  

Human immunodeficiency virus 1 (HIV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hiv1-miR-H1:  MIMAT0004480          HSPB6:  NM_144617     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hiv1-miR-H1	HSPB6
miRBase Accession/Entrez ID	MIMAT0004480	126393
Organism	Human immunodeficiency virus 1 (HIV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	HEL55//Hsp20//PPP1R91

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	HSPB6	chr19:36245572-36245573(-) m6A 3'UTR       24981863//27773535 chr19:36245668-36245669(-) m6A 3'UTR       24981863//27773535 chr19:36245711-36245712(-) m6A 3'UTR       24284625//24981863//27773535 chr19:36245735-36245736(-) m6A 3'UTR       24981863//27773535 chr19:36245744-36245745(-) m6A 3'UTR       24981863//27773535 chr19:36245758-36245759(-) m6A 3'UTR       24981863//27773535 chr19:36245775-36245776(-) m6A 3'UTR       24981863//27773535 chr19:36245803-36245804(-) m6A 3'UTR       24981863//27773535 chr19:36245811-36245812(-) m6A 3'UTR       24981863//27773535 chr19:36245831-36245832(-) m6A 3'UTR       25456834//24981863//27773535 chr19:36245873-36245874(-) m6A 3'UTR       25456834//24981863//27773535 chr19:36245897-36245898(-) m6A 3'UTR       25456834//24981863//27773535 chr19:36245920-36245921(-) m6A 3'UTR       24981863//27773535 chr19:36245934-36245935(-) m6A 3'UTR       24981863//27773535 chr19:36245943-36245944(-) m6A 3'UTR       24981863//27773535 chr19:36246004-36246005(-) m6A 3'UTR       24981863//27773535 chr19:36246061-36246062(-) m6A 3'UTR       24981863//27773535 chr19:36246097-36246098(-) m6A 3'UTR       24981863//27773535 chr19:36246178-36246179(-) m6A 3'UTR       24981863//27773535 chr19:36246254-36246255(-) m6A 3'UTR       25456834//24981863//27773535 chr19:36246274-36246275(-) m6A 3'UTR       25456834//24981863//27773535 chr19:36246321-36246322(-) m6A 3'UTR       25456834//24981863//27773535 chr19:36247846-36247847(-) m6A CDS       - chr19:36248854-36248855(-) m6A 5'UTR       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hiv1-miR-H1	Exosome Jurkat-derived T cell line (J77cl20)     21505438
	HSPB6	Exosome Blood     - Nucleoplasm K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hiv1-miR-H1
Interactor2: HSPB6

Evidence Support:

Prediction-Evidence	cRep//miRanda//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg