Detail Information

Basic Information:


  VIRBase ID:  

VHID00694174

  Virus:  

Human immunodeficiency virus 1 (HIV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hiv1-miR-H1:           L3MBTL4:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hiv1-miR-H1 L3MBTL4
miRBase
Accession/Entrez ID		 MIMAT0004480 91133
Organism Human immunodeficiency virus 1 (HIV-1) Homo sapiens
Category miRNA mRNA
Alias - HsT1031

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR L3MBTL4
chr18:6245763(-) A-I      intronic
chr18:6245803(-) A-I      intronic
chr18:6245808(-) A-I      intronic
chr18:6245809(-) A-I      intronic
chr18:6153178(-) A-I      intronic
chr18:6299779(-) A-I      intronic
chr18:6153176(-) A-I      intronic
chr18:6302907(-) A-I      intronic
chr18:6303236(-) A-I      intronic
chr18:6362072(-) A-I      intronic
chr18:6153141(-) A-I      intronic
chr18:6153132(-) A-I      intronic
chr18:6400692(-) A-I      intronic
chr18:6153136(-) A-I      intronic
chr18:6245726(-) A-I      intronic
chr18:6245743(-) A-I      intronic
chr18:6245757(-) A-I      intronic
chr18:6245758(-) A-I      intronic
chr18:5980493(-) A-I      intronic
chr18:6376675(-) A-I      intronic
chr18:6071548(-) A-I      intronic
chr18:6071549(-) A-I      intronic
chr18:6071572(-) A-I      intronic
chr18:6376695(-) A-I      intronic
chr18:6376711(-) A-I      intronic
chr18:6400461(-) A-I      intronic
chr18:6400501(-) A-I      intronic
chr18:6400616(-) A-I      intronic
chr18:6400615(-) A-I      intronic
chr18:6303214(-) A-I      intronic
chr18:6302816(-) A-I      intronic
chr18:6302790(-) A-I      intronic
chr18:6302758(-) A-I      intronic
chr18:6302739(-) A-I      intronic
chr18:6302727(-) A-I      intronic
chr18:6299952(-) A-I      intronic
chr18:6299737(-) A-I      intronic
chr18:6290599(-) A-I      intronic
chr18:6290584(-) A-I      intronic
chr18:6290573(-) A-I      intronic
chr18:6286102(-) A-I      intronic
chr18:6285942(-) A-I      intronic
chr18:6247748(-) A-I      intronic
chr18:6247624(-) A-I      intronic
chr18:6247606(-) A-I      intronic
chr18:6247575(-) A-I      intronic
chr18:6247574(-) A-I      intronic
chr18:6246856(-) A-I      intronic
chr18:6246740(-) A-I      intronic
chr18:6246737(-) A-I      intronic
chr18:6246711(-) A-I      intronic
chr18:6245783(-) A-I      intronic
chr18:6245769(-) A-I      intronic
chr18:6245768(-) A-I      intronic
chr18:6245767(-) A-I      intronic
chr18:6245170(-) A-I      intronic
chr18:6245149(-) A-I      intronic
chr18:6237592(-) A-I      intronic
chr18:6148716(-) A-I      intronic
chr18:6144095(-) A-I      intronic
chr18:6144083(-) A-I      intronic
chr18:6400506(-) A-I      intronic
chr18:6335218(-) A-I      intronic
chr18:6400511(-) A-I      intronic
chr18:6400523(-) A-I      intronic
chr18:6400547(-) A-I      intronic
chr18:6400584(-) A-I      intronic
chr18:6400588(-) A-I      intronic
chr18:6303221(-) A-I      intronic
chr18:6400439(-) A-I      intronic
chr18:6105786(-) A-I      intronic
chr18:6303297(-) A-I      intronic
chr18:6303298(-) A-I      intronic
chr18:6303308(-) A-I      intronic
chr18:6303314(-) A-I      intronic
chr18:6303319(-) A-I      intronic
chr18:6303362(-) A-I      intronic
chr18:6303832(-) A-I      intronic
chr18:6303846(-) A-I      intronic
chr18:6303851(-) A-I      intronic
chr18:6303284(-) A-I      intronic
chr18:6335186(-) A-I      intronic
chr18:6335187(-) A-I      intronic
chr18:6335227(-) A-I      intronic
chr18:6359279(-) A-I      intronic
chr18:6359287(-) A-I      intronic
chr18:6359430(-) A-I      intronic
chr18:6376642(-) A-I      intronic
chr18:6287930(-) A-I      intronic
chr18:6397795(-) A-I      intronic
chr18:6245686(-) A-I      intronic
chr18:6302943(-) A-I      intronic
chr18:6394210(-) A-I      intronic
chr18:6288016(-) A-I      intronic
chr18:6285883(-) A-I      intronic
chr18:6289965(-) A-I      intronic
chr18:6289991(-) A-I      intronic
chr18:6057231(-) A-I      intronic
chr18:6142805(-) A-I      intronic
chr18:6245869(-) A-I      intronic
chr18:6376654(-) A-I      intronic
chr18:6397809(-) A-I      intronic
chr18:6302799(-) A-I      intronic
chr18:6246820(-) A-I      intronic
chr18:5984186(-) A-I      intronic
chr18:6399336(-) A-I      intronic
chr18:6024157(-) A-I      intronic
chr18:6247712(-) A-I      intronic
chr18:6072672(-) A-I      intronic
chr18:6397772(-) A-I      intronic
chr18:6105327(-) A-I      intronic
chr18:6360150(-) A-I      intronic
chr18:6360152(-) A-I      intronic
chr18:6245171(-) A-I      intronic
chr18:6138818(-) A-I      intronic
chr18:5957896(-) A-I      intronic
chr18:6186095(-) A-I      intronic
chr18:6057232(-) A-I      intronic
chr18:6290623(-) A-I      intronic
chr18:5957830(-) A-I      intronic
chr18:6057322(-) A-I      intronic
chr18:6245827(-) A-I      intronic
chr18:6072580(-) A-I      intronic
chr18:6351071(-) A-I      intronic
chr18:6397793(-) A-I      intronic
chr18:6397591(-) A-I      intronic
chr18:6399373(-) A-I      intronic
chr18:6290665(-) A-I      intronic
chr18:6071375(-) A-I      intronic
chr18:6397803(-) A-I      intronic
chr18:6361976(-) A-I      intronic
chr18:6408723(-) A-I      intronic
chr18:6397798(-) A-I      intronic
chr18:6290648(-) A-I      intronic
chr18:6057168(-) A-I      intronic
chr18:6302740(-) A-I      intronic
chr18:6072583(-) A-I      intronic
chr18:5968480(-) A-I      intronic
chr18:6071623(-) A-I      intronic
chr18:6360151(-) A-I      intronic
chr18:6376588(-) A-I      intronic
chr18:6302819(-) A-I      intronic
chr18:6400443(-) A-I      intronic
chr18:6349683(-) A-I      intronic
chr18:6105677(-) A-I      intronic
chr18:6360913(-) A-I      intronic
chr18:6290655(-) A-I      intronic
chr18:6397724(-) A-I      intronic
chr18:6290691(-) A-I      intronic
chr18:6072832(-) A-I      intronic
chr18:6057115(-) A-I      intronic
chr18:6413084(-) A-I      intronic
chr18:6400606(-) A-I      intronic
chr18:6245865(-) A-I      intronic
chr18:6404783(-) A-I      intronic
chr18:6287918(-) A-I      intronic
chr18:6246803(-) A-I      intronic
chr18:6290084(-) A-I      intronic
chr18:6246889(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED L3MBTL4
chr18:6057115(-) A-I intron -    15342557
chr18:6057167(-) A-I intron -    15342557
chr18:6057231(-) A-I intron -    15342557
chr18:6057232(-) A-I intron -    15342557
chr18:6057323(-) A-I intron -    15342557
chr18:6395279(-) A-I intron -    15342557
chr18:6395336(-) A-I intron -    15342557
chr18:6395557(-) A-I intron -    15342557
chr18:6397591(-) A-I intron -    15342557
chr18:6397724(-) A-I intron -    15342557
chr18:6397739(-) A-I intron -    15342557
chr18:6397772(-) A-I intron -    15342557
chr18:6397773(-) A-I intron -    15342557
chr18:6397793(-) A-I intron -    15342557
chr18:6397795(-) A-I intron -    15342557
chr18:6397798(-) A-I intron -    15342557
chr18:6397803(-) A-I intron -    15342557
chr18:6397809(-) A-I intron -    15342557

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase L3MBTL4
chr18:5955729-5955730(-) m6A 3'UTR       27773535
chr18:5955895-5955896(-) m6A 3'UTR       27773535
chr18:5955951-5955952(-) m6A 3'UTR       27773535
chr18:5955999-5956000(-) m6A 3'UTR       25456834//27773535//22608085
chr18:5956105-5956106(-) m6A 3'UTR       27773535//22608085
chr18:5956186-5956187(-) m6A 3'UTR       27773535
chr18:5956204-5956205(-) m6A 3'UTR       -
chr18:6031095-6031096(-) m6A 3'UTR//intron       -
chr18:6031131-6031132(-) m6A 3'UTR//intron       -
chr18:6031149-6031150(-) m6A 3'UTR//intron       -

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hiv1-miR-H1
Exosome Jurkat-derived T cell line (J77cl20)     21505438
L3MBTL4
Cytosol HCC cell line (HepG2)     -
Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Insoluble cytoplasm HCC cell line (HepG2)     -
Membrane HCC cell line (HepG2)     -
Nucleus HCC cell line (HepG2)     -

Interaction Network (The top 100 interactions):


Interactor1: hiv1-miR-H1
Interactor2: L3MBTL4

Evidence Support:


Prediction-Evidence cRep//miRanda//Targetscan
Support Database RepTar//VmiReg

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