Basic Information:

  VIRBase ID:  

VHID00694063

  Virus:  

Human immunodeficiency virus 1 (HIV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hiv1-miR-H1:  MIMAT0004480          ZCCHC3:  NM_033089     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hiv1-miR-H1	ZCCHC3
miRBase Accession/Entrez ID	MIMAT0004480	85364
Organism	Human immunodeficiency virus 1 (HIV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	C20orf99

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ZCCHC3	chr20:278137-278138(+) m6A 5'UTR       25456834//24981863 chr20:278142-278143(+) m6A 5'UTR       25456834//24981863 chr20:278377-278378(+) m1A CDS       26863196//26863410 chr20:278480-278481(+) m6A CDS       24209618//25456834//24981863//22575960//22608085 chr20:278555-278556(+) m6A CDS       24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr20:278599-278600(+) m1A CDS       26863196 chr20:278774-278775(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr20:278816-278817(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr20:278939-278940(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr20:278951-278952(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr20:279032-279033(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr20:279109-279110(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr20:279229-279230(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr20:279253-279254(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr20:279281-279282(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr20:279366-279367(+) m6A CDS       24284625//24209618//25456834//24981863//22608085 chr20:279442-279443(+) m6A 3'UTR       24284625//24209618//24981863 chr20:279466-279467(+) m6A 3'UTR       24284625//24209618//24981863 chr20:279500-279501(+) m6A 3'UTR       24284625//24981863//26404942 chr20:279512-279513(+) m6A 3'UTR       24284625//24981863//26404942//22608085 chr20:279549-279550(+) m6A 3'UTR       24284625//24981863//26404942//22608085 chr20:279560-279561(+) m6A 3'UTR       24284625//24981863//26404942//22608085 chr20:279582-279583(+) m6A 3'UTR       24284625//24981863//26404942//22608085 chr20:279648-279649(+) m6A 3'UTR       24284625//24981863//26404942//22608085 chr20:279892-279893(+) m6A 3'UTR       24284625//24981863//22608085 chr20:279996-279997(+) m6A 3'UTR       24284625//24981863//26404942//22608085 chr20:280083-280084(+) m6A 3'UTR       24284625//24981863//26404942//22608085 chr20:280162-280163(+) m6A 3'UTR       24284625//24981863//26404942//22608085 chr20:280180-280181(+) m6A 3'UTR       24284625//24981863//26404942//22608085 chr20:280209-280210(+) m6A 3'UTR       24284625//24981863//26404942//22608085 chr20:280481-280482(+) m6A 3'UTR       24284625//26404942 chr20:280488-280489(+) m6A 3'UTR       24284625//26404942 chr20:280667-280668(+) m6A 3'UTR       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hiv1-miR-H1	Exosome Jurkat-derived T cell line (J77cl20)     21505438
	ZCCHC3	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hiv1-miR-H1
Interactor2: ZCCHC3

Evidence Support:

Prediction-Evidence	miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg