Basic Information:

  VIRBase ID:  

VHID00693698

  Virus:  

Human immunodeficiency virus 1 (HIV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hiv1-miR-H1:  MIMAT0004480          APOL4:  NM_145660     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hiv1-miR-H1	APOL4
miRBase Accession/Entrez ID	MIMAT0004480	80832
Organism	Human immunodeficiency virus 1 (HIV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	APOL-IV//APOLIV

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	APOL4	chr22:36598304(-) A-I      intronic chr22:36598291(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	APOL4	chr22:36585623-36585624(-) m6A 3'UTR//exon       24981863 chr22:36585641-36585642(-) m6A 3'UTR//exon       24981863 chr22:36585663-36585664(-) m6A 3'UTR//exon       24981863 chr22:36585707-36585708(-) m6A 3'UTR//exon       24981863 chr22:36585722-36585723(-) m6A 3'UTR//exon       24981863 chr22:36585766-36585767(-) m6A 3'UTR//exon       24981863 chr22:36585807-36585808(-) m6A 3'UTR//exon       24981863 chr22:36586840-36586841(-) m6A 3'UTR//exon       24981863 chr22:36586942-36586943(-) m6A 3'UTR//exon       24981863 chr22:36586966-36586967(-) m6A 3'UTR//exon       24981863 chr22:36587033-36587034(-) m6A 3'UTR//exon       24981863 chr22:36587081-36587082(-) m6A 3'UTR//exon       24981863 chr22:36587096-36587097(-) m6A 3'UTR//exon       24981863 chr22:36587237-36587238(-) m6A CDS//exon       24981863 chr22:36587246-36587247(-) m6A CDS//exon       24981863 chr22:36587306-36587307(-) m6A CDS//exon       24981863 chr22:36587349-36587350(-) m6A CDS//exon       24981863 chr22:36587358-36587359(-) m6A CDS//exon       24981863 chr22:36587519-36587520(-) m6A CDS//exon       24981863//22575960 chr22:36587575-36587576(-) m6A CDS//exon       24981863//22575960 chr22:36587597-36587598(-) m6A CDS//exon       24981863 chr22:36587873-36587874(-) m6A CDS//exon       24981863 chr22:36587889-36587890(-) m6A CDS//exon       24981863 chr22:36587895-36587896(-) m6A CDS//exon       24981863 chr22:36597896-36597897(-) m6A 5'UTR//exon//intron       24981863 chr22:36597931-36597932(-) m6A 5'UTR//exon//intron       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hiv1-miR-H1	Exosome Jurkat-derived T cell line (J77cl20)     21505438
	APOL4	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hiv1-miR-H1
Interactor2: APOL4

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg