Basic Information:

  VIRBase ID:  

VHID00691011

  Virus:  

Human immunodeficiency virus 1 (HIV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hiv1-miR-H1:  MIMAT0004480          BTN2A2:  NM_181531     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hiv1-miR-H1	BTN2A2
miRBase Accession/Entrez ID	MIMAT0004480	10385
Organism	Human immunodeficiency virus 1 (HIV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	BT2.2//BTF2//BTN2.2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	BTN2A2	chr6:26386046(+) A-I      intronic chr6:26389183(+) A-I      intronic chr6:26389146(+) A-I      intronic chr6:26387780(+) A-I      intronic chr6:26384559(+) A-I      intronic chr6:26387687(+) A-I      intronic chr6:26384490(+) A-I      intronic chr6:26387744(+) A-I      intronic chr6:26387703(+) A-I      intronic chr6:26385978(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	BTN2A2	chr6:26387687(+) A-I intron -    22327324 chr6:26385978(+) A-G intron -    22484847 chr6:26387687(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	BTN2A2	chr6:26383338-26383339(+) m6A 5'UTR//exon       24981863 chr6:26383347-26383348(+) m6A 5'UTR//exon       24981863 chr6:26383358-26383359(+) m6A 5'UTR//exon       24981863 chr6:26383390-26383391(+) m6A 5'UTR//exon       24981863 chr6:26383413-26383414(+) m6A 5'UTR//intron       24981863 chr6:26385412-26385413(+) m6A 3'UTR//CDS//exon//intron       24981863 chr6:26385464-26385465(+) m6A 3'UTR//CDS//exon//intron       24981863 chr6:26390510-26390511(+) m6A exon//intron       25456834//24981863 chr6:26390604-26390605(+) m6A exon//intron       25456834 chr6:26390715-26390716(+) m6A exon//intron       - chr6:26392474-26392475(+) m6A 3'UTR//CDS//intron       24981863 chr6:26392504-26392505(+) m6A 3'UTR//CDS//intron       24981863 chr6:26392524-26392525(+) m6A 3'UTR//intron       24981863 chr6:26392536-26392537(+) m6A 3'UTR//intron       22608085 chr6:26392543-26392544(+) m6A 3'UTR//intron       22608085 chr6:26392569-26392570(+) m6A 3'UTR//intron       25456834//22608085 chr6:26392582-26392583(+) m6A 3'UTR//intron       25456834//22608085 chr6:26392589-26392590(+) m6A 3'UTR//intron       25456834//22608085 chr6:26392623-26392624(+) m6A 3'UTR//CDS//intron       25456834//24981863//22608085 chr6:26392656-26392657(+) m6A 3'UTR//CDS//intron       25456834//24981863//22608085 chr6:26392765-26392766(+) m6A 3'UTR//CDS//intron       24284625//25456834//24981863//22608085 chr6:26392805-26392806(+) m6A 3'UTR//CDS//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr6:26392822-26392823(+) m6A 3'UTR//CDS//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr6:26392877-26392878(+) m6A 3'UTR//CDS//intron       24209618//25456834//24981863//27773535//22608085 chr6:26392896-26392897(+) m6A 3'UTR//CDS//intron       24209618//25456834//24981863//22608085 chr6:26392974-26392975(+) m6A 3'UTR//CDS//intron       24209618//25456834//24981863//22608085 chr6:26393013-26393014(+) m6A 3'UTR//CDS//intron       24209618//24981863//22608085 chr6:26393161-26393162(+) m6A 3'UTR//CDS//intron       24284625//24209618//25456834//24981863//27773535//22608085 chr6:26393177-26393178(+) m6A 3'UTR//CDS//intron       24284625//24209618//25456834//24981863//27773535//22608085 chr6:26393209-26393210(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//22608085 chr6:26393274-26393275(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//22608085 chr6:26393307-26393308(+) m6A 3'UTR//intron       24284625//25456834//24981863//22608085 chr6:26393431-26393432(+) m6A 3'UTR//intron       24981863//27773535//22608085 chr6:26393489-26393490(+) m6A 3'UTR//intron       25456834//24981863//27773535//22608085 chr6:26393555-26393556(+) m6A 3'UTR//intron       24284625//25456834//24981863//27773535//22608085 chr6:26393613-26393614(+) m6A 3'UTR//intron       25456834//24981863//27773535//22608085 chr6:26393633-26393634(+) m6A 3'UTR//intron       25456834//24981863//27773535//22608085 chr6:26393667-26393668(+) m6A 3'UTR//intron       25456834//24981863//27773535//22608085 chr6:26393685-26393686(+) m6A 3'UTR//intron       24209618//25456834//24981863//27773535//22608085 chr6:26393798-26393799(+) m6A 3'UTR//intron       24209618//25456834//24981863//27773535//22608085 chr6:26393822-26393823(+) m6A 3'UTR//intron       24209618//25456834//24981863//27773535//22608085 chr6:26393828-26393829(+) m6A 3'UTR//intron       24209618//25456834//24981863//27773535//22608085 chr6:26393869-26393870(+) m6A 3'UTR//intron       24209618//25456834//24981863//27773535//22608085 chr6:26393939-26393940(+) m6A 3'UTR//intron       25456834//24981863//26404942//27773535//22608085 chr6:26393973-26393974(+) m6A 3'UTR//intron       25456834//24981863//26404942//27773535//22608085 chr6:26393989-26393990(+) m6A 3'UTR//intron       25456834//24981863//26404942//27773535//22608085 chr6:26394015-26394016(+) m6A 3'UTR//intron       25456834//24981863//26404942//22608085 chr6:26394035-26394036(+) m6A 3'UTR//intron       24981863//26404942//22608085 chr6:26394715-26394716(+) m6A 3'UTR       25456834//24981863//22608085 chr6:26394739-26394740(+) m6A 3'UTR       25456834//24981863//22608085 chr6:26394747-26394748(+) m6A 3'UTR       25456834//24981863//22608085 chr6:26394770-26394771(+) m6A 3'UTR       25456834//24981863//22608085 chr6:26394778-26394779(+) m6A 3'UTR       25456834//24981863//22608085 chr6:26394821-26394822(+) m6A 3'UTR       25456834//24981863//22608085 chr6:26394865-26394866(+) m6A 3'UTR       25456834//24981863//22608085 chr6:26394871-26394872(+) m6A 3'UTR       25456834//24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hiv1-miR-H1	Exosome Jurkat-derived T cell line (J77cl20)     21505438
	BTN2A2	Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hiv1-miR-H1
Interactor2: BTN2A2

Evidence Support:

Prediction-Evidence	miRanda//PITA//Targetscan
Support Database	VmiReg