Basic Information:

  VIRBase ID:  

VHID00690386

  Virus:  

Human immunodeficiency virus 1 (HIV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hiv1-miR-H1:  MIMAT0004480          IRS2:  NM_003749     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hiv1-miR-H1	IRS2
miRBase Accession/Entrez ID	MIMAT0004480	8660
Organism	Human immunodeficiency virus 1 (HIV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	IRS-2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	IRS2	chr13:110427660(-) A-I      intronic chr13:110428361(-) A-I      intronic chr13:110427538(-) A-I      intronic chr13:110428329(-) A-I      intronic chr13:110428439(-) A-I      intronic chr13:110428449(-) A-I      intronic chr13:110427568(-) A-I      intronic chr13:110428427(-) A-I      intronic chr13:110427533(-) A-I      intronic chr13:110427562(-) A-I      intronic chr13:110427563(-) A-I      intronic chr13:110427493(-) A-I      intronic chr13:110427698(-) A-I      intronic chr13:110428387(-) A-I      intronic chr13:110428384(-) A-I      intronic chr13:110427617(-) A-I      intronic chr13:110428307(-) A-I      intronic chr13:110427492(-) A-I      intronic chr13:110427551(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	IRS2	chr13:110406278-110406279(-) m6A 3'UTR       27773535 chr13:110406283-110406284(-) m6A 3'UTR       27773535 chr13:110407548-110407549(-) m6A 3'UTR       - chr13:110407580-110407581(-) m6A 3'UTR       - chr13:110407589-110407590(-) m6A 3'UTR       - chr13:110407831-110407832(-) m6A 3'UTR       25456834//24981863//27773535 chr13:110407972-110407973(-) m6A 3'UTR       24284625//25456834//24981863//26404942//27773535//22575960//22608085 chr13:110408009-110408010(-) m6A 3'UTR       24284625//25456834//24981863//26404942//27773535//22575960//22608085 chr13:110408076-110408077(-) m6A 3'UTR       24284625//25456834//24981863//27773535//22575960//22608085 chr13:110408147-110408148(-) m6A 3'UTR       24284625//25456834//24981863//27773535//22575960//22608085 chr13:110408509-110408510(-) m6A 3'UTR       24284625//25456834//24981863//26404942//27773535//22575960//22608085 chr13:110408519-110408520(-) m6A 3'UTR       24284625//25456834//24981863//26404942//27773535//22575960//22608085 chr13:110434541-110434542(-) m6A CDS       24284625//25456834//24981863//27371828//27773536//22575960 chr13:110434561-110434562(-) m6A CDS       24284625//25456834//24981863//27371828//27773536//22575960 chr13:110434673-110434674(-) m6A CDS       24284625//25456834//24981863//27371828//22575960 chr13:110434739-110434740(-) m6A CDS       24284625//25456834//24981863//27371828//22575960 chr13:110434949-110434950(-) m6A CDS       24284625//25456834//24981863//27773536//22575960 chr13:110434984-110434985(-) m6A CDS       24284625//24981863//27773536//22575960 chr13:110435017-110435018(-) m6A CDS       24284625//24981863//27773536//22575960 chr13:110435197-110435198(-) m6A CDS       24284625//24981863//22575960 chr13:110435206-110435207(-) m6A CDS       24284625//24981863//22575960 chr13:110435461-110435462(-) m6A CDS       24284625//24981863//22575960 chr13:110435944-110435945(-) m6A CDS       24284625//24981863//22575960 chr13:110436106-110436107(-) m6A CDS       24284625//25456834//24981863//27371828//22575960 chr13:110436184-110436185(-) m6A CDS       24284625//25456834//24981863//27371828//27773536//22575960 chr13:110436245-110436246(-) m6A CDS       24284625//25456834//24981863//27371828//27773536//22575960 chr13:110436494-110436495(-) Gm CDS       - chr13:110436499-110436500(-) m6A CDS       24284625//24981863//22575960 chr13:110436508-110436509(-) m6A CDS       24284625//24981863//22575960 chr13:110436677-110436678(-) m6A CDS       24284625//25456834//24981863//27371828//27773536//22575960//22608085 chr13:110436697-110436698(-) m6A CDS       24284625//25456834//24981863//27371828//27773536//22575960//22608085 chr13:110436703-110436704(-) m6A CDS       24284625//25456834//24981863//27371828//27773536//22575960//22608085 chr13:110436763-110436764(-) m6A CDS       24284625//25456834//24981863//27371828//27773536//22575960//22608085 chr13:110437544-110437545(-) m6A CDS       24284625//25456834//24981863//27773536//22575960//22608085 chr13:110437555-110437556(-) m6A CDS       24284625//25456834//24981863//27773536//22575960//22608085 chr13:110437645-110437646(-) m6A CDS       24284625//25456834//24981863//27371828//27773536//22575960//22608085 chr13:110437669-110437670(-) m6A CDS       24284625//25456834//24981863//27371828//27773536//22575960//22608085 chr13:110437765-110437766(-) m6A CDS       24284625//25456834//24981863//27371828//22575960//22608085 chr13:110437798-110437799(-) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr13:110437855-110437856(-) m6A CDS       24284625//25456834//24981863//22575960 chr13:110438101-110438102(-) m6A CDS       24284625//25456834//24981863//27371828//27773536//22575960//22608085 chr13:110438244-110438245(-) m6A CDS       22575960 chr13:110438550-110438551(-) m6A 5'UTR       25456834//24981863//27773536//22575960 chr13:110438729-110438730(-) m6A 5'UTR       - chr13:110438831-110438832(-) m6A 5'UTR       24981863//27773536 chr13:110438908-110438909(-) m6A 5'UTR       24981863//27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hiv1-miR-H1	Exosome Jurkat-derived T cell line (J77cl20)     21505438
	IRS2	Exosome Blood     - Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hiv1-miR-H1
Interactor2: IRS2

Evidence Support:

Prediction-Evidence	miRanda//PITA//Targetscan
Support Database	VmiReg