Detail Information

Basic Information:


  VIRBase ID:  

VHID00686341

  Virus:  

Human immunodeficiency virus 1 (HIV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hiv1-miR-N367:           SINHCAF:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hiv1-miR-N367 SINHCAF
miRBase
Accession/Entrez ID		 MIMAT0004478 58516
Organism Human immunodeficiency virus 1 (HIV-1) Homo sapiens
Category miRNA mRNA
Alias - C12orf14//FAM60A//L4//TERA

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR SINHCAF
chr12:31443245(-) A-I      intronic
chr12:31443246(-) A-I      intronic
chr12:31443255(-) A-I      intronic
chr12:31461042(-) A-I      intronic
chr12:31461048(-) A-I      intronic
chr12:31443204(-) A-I      intronic
chr12:31460407(-) A-I      intronic
chr12:31443220(-) A-I      intronic
chr12:31462040(-) A-I      intronic
chr12:31462026(-) A-I      intronic
chr12:31462018(-) A-I      intronic
chr12:31462010(-) A-I      intronic
chr12:31461993(-) A-I      intronic
chr12:31461979(-) A-I      intronic
chr12:31461146(-) A-I      intronic
chr12:31461116(-) A-I      intronic
chr12:31461069(-) A-I      intronic
chr12:31461052(-) A-I      intronic
chr12:31461050(-) A-I      intronic
chr12:31461006(-) A-I      intronic
chr12:31460979(-) A-I      intronic
chr12:31460959(-) A-I      intronic
chr12:31460432(-) A-I      intronic
chr12:31460365(-) A-I      intronic
chr12:31460310(-) A-I      intronic
chr12:31458922(-) A-I      intronic
chr12:31458816(-) A-I      intronic
chr12:31458766(-) A-I      intronic
chr12:31458762(-) A-I      intronic
chr12:31449784(-) A-I      intronic
chr12:31449776(-) A-I      intronic
chr12:31449694(-) A-I      intronic
chr12:31449680(-) A-I      intronic
chr12:31449640(-) A-I      intronic
chr12:31449568(-) A-I      intronic
chr12:31468987(-) A-I      intronic
chr12:31449546(-) A-I      intronic
chr12:31449540(-) A-I      intronic
chr12:31449372(-) A-I      intronic
chr12:31449279(-) A-I      intronic
chr12:31449196(-) A-I      intronic
chr12:31445430(-) A-I      intronic
chr12:31445429(-) A-I      intronic
chr12:31445397(-) A-I      intronic
chr12:31445351(-) A-I      intronic
chr12:31445350(-) A-I      intronic
chr12:31445347(-) A-I      intronic
chr12:31445284(-) A-I      intronic
chr12:31445219(-) A-I      intronic
chr12:31444615(-) A-I      intronic
chr12:31444574(-) A-I      intronic
chr12:31444532(-) A-I      intronic
chr12:31443925(-) A-I      intronic
chr12:31443917(-) A-I      intronic
chr12:31443890(-) A-I      intronic
chr12:31449558(-) A-I      intronic
chr12:31443792(-) A-I      intronic
chr12:31466711(-) A-I      intronic
chr12:31443743(-) A-I      intronic
chr12:31443260(-) A-I      intronic
chr12:31443199(-) A-I      intronic
chr12:31443119(-) A-I      intronic
chr12:31467277(-) A-I      intronic
chr12:31462769(-) A-I      intronic
chr12:31467216(-) A-I      intronic
chr12:31467215(-) A-I      intronic
chr12:31443764(-) A-I      intronic
chr12:31466721(-) A-I      intronic
chr12:31466720(-) A-I      intronic
chr12:31466698(-) A-I      intronic
chr12:31466675(-) A-I      intronic
chr12:31466154(-) A-I      intronic
chr12:31463864(-) A-I      intronic
chr12:31462053(-) A-I      intronic
chr12:31462794(-) A-I      intronic
chr12:31443818(-) A-I      intronic
chr12:31448643(-) A-I      intronic
chr12:31449677(-) A-I      intronic
chr12:31449857(-) A-I      intronic
chr12:31442811(-) A-I      intronic
chr12:31467269(-) A-I      intronic
chr12:31466754(-) A-I      intronic
chr12:31439498(-) A-I      intronic
chr12:31466126(-) A-I      intronic
chr12:31461094(-) A-I      intronic
chr12:31472273(-) A-I      intronic
chr12:31443829(-) A-I      intronic
chr12:31450288(-) A-I      intronic
chr12:31460286(-) A-I      intronic
chr12:31449270(-) A-I      intronic
chr12:31460287(-) A-I      intronic
chr12:31456427(-) A-I      intronic
chr12:31449264(-) A-I      intronic
chr12:31466777(-) A-I      intronic
chr12:31450238(-) A-I      intronic
chr12:31462696(-) A-I      intronic
chr12:31460377(-) A-I      intronic
chr12:31443791(-) A-I      intronic
chr12:31435421(-) A-I      3'UTR
chr12:31435400(-) A-I      3'UTR
chr12:31435434(-) A-I      3'UTR
chr12:31435456(-) A-I      3'UTR
chr12:31435391(-) A-I      3'UTR
chr12:31435447(-) A-I      3'UTR
chr12:31456994(-) A-I      ncRNA
chr12:31456958(-) A-I      ncRNA
chr12:31466752(-) A-I      intronic
chr12:31467421(-) A-I      intronic
chr12:31466757(-) A-I      intronic
chr12:31463879(-) A-I      intronic
chr12:31449248(-) A-I      intronic
chr12:31462759(-) A-I      intronic
chr12:31449981(-) A-I      intronic
chr12:31438852(-) A-I      intronic
chr12:31444598(-) A-I      intronic
chr12:31460367(-) A-I      intronic
chr12:31466193(-) A-I      intronic
chr12:31445311(-) A-I      intronic
chr12:31449654(-) A-I      intronic
chr12:31443227(-) A-I      intronic
chr12:31462767(-) A-I      intronic
chr12:31448694(-) A-I      intronic
chr12:31461002(-) A-I      intronic
chr12:31461053(-) A-I      intronic
chr12:31467254(-) A-I      intronic
chr12:31467338(-) A-I      intronic
chr12:31466738(-) A-I      intronic
chr12:31449225(-) A-I      intronic
chr12:31449228(-) A-I      intronic
chr12:31463941(-) A-I      intronic
chr12:31444646(-) A-I      intronic
chr12:31466610(-) A-I      intronic
chr12:31461057(-) A-I      intronic
chr12:31464030(-) A-I      intronic
chr12:31449260(-) A-I      intronic
chr12:31466240(-) A-I      intronic
chr12:31460402(-) A-I      intronic
chr12:31463901(-) A-I      intronic
chr12:31443240(-) A-I      intronic
chr12:31445427(-) A-I      intronic
chr12:31439988(-) A-I      intronic
chr12:31443782(-) A-I      intronic
chr12:31438862(-) A-I      intronic
chr12:31449707(-) A-I      intronic
chr12:31449379(-) A-I      intronic
chr12:31443932(-) A-I      intronic
chr12:31443831(-) A-I      intronic
chr12:31439476(-) A-I      intronic
chr12:31460389(-) A-I      intronic
chr12:31460071(-) A-I      intronic
chr12:31460970(-) A-I      intronic
chr12:31462833(-) A-I      intronic
chr12:31443214(-) A-I      intronic
chr12:31463900(-) A-I      intronic
chr12:31461169(-) A-I      intronic
chr12:31460323(-) A-I      intronic
chr12:31466609(-) A-I      intronic
chr12:31458828(-) A-I      intronic
chr12:31461012(-) A-I      intronic
chr12:31439989(-) A-I      intronic
chr12:31449982(-) A-I      intronic
chr12:31449657(-) A-I      intronic
chr12:31466123(-) A-I      intronic
chr12:31452485(-) A-I      intronic
chr12:31458772(-) A-I      intronic
chr12:31466188(-) A-I      intronic
chr12:31461039(-) A-I      intronic
chr12:31462764(-) A-I      intronic
chr12:31449188(-) A-I      intronic
chr12:31460334(-) A-I      intronic
chr12:31460487(-) A-I      intronic
chr12:31460925(-) A-I      intronic
chr12:31442962(-) A-I      intronic
chr12:31439924(-) A-I      intronic
chr12:31460483(-) A-I      intronic
chr12:31467253(-) A-I      intronic
chr12:31461946(-) A-I      intronic
chr12:31463971(-) A-I      intronic
chr12:31435555(-) A-I      3'UTR
chr12:31435473(-) A-I      3'UTR
chr12:31435407(-) A-I      3'UTR
chr12:31435448(-) A-I      3'UTR
chr12:31435444(-) A-I      3'UTR
chr12:31435416(-) A-I      3'UTR
chr12:31435408(-) A-I      3'UTR
chr12:31435474(-) A-I      3'UTR

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate SINHCAF
Chromatin K562 cells     -
Cytoplasm Nasopharyngeal carcinoma cells     20498841
Exosome Blood     -
Membrane HCC cell line (HepG2)|K562 cells     -
Nucleoplasm K562 cells     -
Nucleus Nasopharyngeal carcinoma cells     20498841
Nucleus HCC cell line (HepG2)|K562 cells     -
Ribosome Colon cancer cells     24393600

Related Drug Information:


Resource Symbol Drug Name PubChem ID
RNAactDrug hiv1-miR-N367
Topotecan       60700

Interaction Network (The top 100 interactions):


Interactor1: hiv1-miR-N367
Interactor2: SINHCAF

Evidence Support:


Prediction-Evidence miRanda//PITA
Support Database VmiReg

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