Detail Information

Basic Information:


  VIRBase ID:  

VHID00683930

  Virus:  

Human immunodeficiency virus 1 (HIV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hiv1-miR-N367:           EPHA8:      

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Interactor Information:


Interactor1 Interactor2
Symbol hiv1-miR-N367 EPHA8
miRBase
Accession/Entrez ID
MIMAT0004478 2046
Organism Human immunodeficiency virus 1 (HIV-1) Homo sapiens
Category miRNA mRNA
Alias - EEK//EK3//HEK3

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR EPHA8
chr1:22906732(+) A-I      intronic
chr1:22918482(+) A-I      intronic
chr1:22898383(+) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase EPHA8
chr1:22902910-22902911(+) m6A CDS       24981863//22608085
chr1:22902938-22902939(+) m6A CDS       25456834//24981863//22608085
chr1:22903109-22903110(+) m6A CDS       22608085
chr1:22903271-22903272(+) m6A CDS       24209618//25456834//24981863//22608085
chr1:22915603-22915604(+) m6A CDS       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate EPHA8
Exosome Blood     -

Related Drug Information:


Resource Symbol Drug Name PubChem ID
RNAactDrug hiv1-miR-N367
Topotecan       60700

Interaction Network (The top 100 interactions):


Interactor1: hiv1-miR-N367
Interactor2: EPHA8

Evidence Support:


Prediction-Evidence miRanda//PITA//Targetscan
Support Database VmiReg

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