Basic Information:

  VIRBase ID:  

VHID00683890

  Virus:  

Human immunodeficiency virus 1 (HIV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hiv1-miR-N367:  MIMAT0004478          DUSP4:  NM_057158     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hiv1-miR-N367	DUSP4
miRBase Accession/Entrez ID	MIMAT0004478	1846
Organism	Human immunodeficiency virus 1 (HIV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	HVH2//MKP-2//MKP2//TYP

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	DUSP4	chr8:29197408(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	DUSP4	chr8:29200683(-) A-T intron -    22484847 chr8:29200684(-) G-T intron -    22484847 chr8:29202632(-) T-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	DUSP4	chr8:29190789-29190790(-) m6A 3'UTR       - chr8:29190800-29190801(-) m6A 3'UTR       - chr8:29190860-29190861(-) m6A 3'UTR       24981863 chr8:29190904-29190905(-) m6A 3'UTR       24981863 chr8:29190943-29190944(-) m6A 3'UTR       24981863 chr8:29191405-29191406(-) m6A 3'UTR       26404942 chr8:29191898-29191899(-) m6A 3'UTR       26404942 chr8:29191922-29191923(-) m6A 3'UTR       26404942 chr8:29191942-29191943(-) m6A 3'UTR       26404942 chr8:29191996-29191997(-) m6A 3'UTR       26404942 chr8:29192051-29192052(-) m6A 3'UTR       26404942 chr8:29192058-29192059(-) m6A 3'UTR       26404942 chr8:29192067-29192068(-) m6A 3'UTR       26404942 chr8:29192087-29192088(-) m6A 3'UTR       26404942 chr8:29192105-29192106(-) m6A 3'UTR       26404942 chr8:29192145-29192146(-) m6A 3'UTR       26404942 chr8:29192187-29192188(-) m6A 3'UTR       26404942 chr8:29192192-29192193(-) m6A 3'UTR       26404942 chr8:29192491-29192492(-) m6A 3'UTR       26404942 chr8:29192496-29192497(-) m6A 3'UTR       26404942 chr8:29192577-29192578(-) m6A 3'UTR       26404942 chr8:29192712-29192713(-) m6A 3'UTR       - chr8:29192755-29192756(-) m6A 3'UTR       - chr8:29192935-29192936(-) m6A 3'UTR       - chr8:29193715-29193716(-) m6A 3'UTR       24981863//27773535 chr8:29193906-29193907(-) m6A 3'UTR       27773535 chr8:29193978-29193979(-) m6A 3'UTR       27773535 chr8:29194141-29194142(-) m6A 3'UTR       27773535 chr8:29194215-29194216(-) m6A 3'UTR       24284625//24981863//26404942//27773535 chr8:29194303-29194304(-) m6A 3'UTR       24284625//24981863//28052920//26404942//27773535 chr8:29194349-29194350(-) m6A 3'UTR       24284625//25456834//24981863//28052920//27773535//27371828//22575960 chr8:29194354-29194355(-) m6A 3'UTR       24284625//25456834//24981863//28052920//27773535//27371828//22575960 chr8:29194378-29194379(-) m6A 3'UTR       24284625//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr8:29194464-29194465(-) m6A 3'UTR       24284625//25456834//24981863//28052920//26404942//27773535//27371828//22575960 chr8:29194520-29194521(-) m6A 3'UTR       24284625//25456834//24981863//28052920//26404942//27773535//27371828//27773536 chr8:29194661-29194662(-) m6A CDS       24284625//24981863//27371828 chr8:29194683-29194684(-) m6A CDS       24284625//24981863//27371828 chr8:29194915-29194916(-) m6A CDS       24284625//25456834//24981863//26404942 chr8:29195883-29195884(-) m6A CDS       24284625//24981863//26404942//27773535 chr8:29195896-29195897(-) m6A CDS       24284625//24981863//26404942//27773535 chr8:29195905-29195906(-) m6A CDS       24284625//24981863//26404942//27773535 chr8:29195953-29195954(-) m6A CDS       24284625//24981863//27773535 chr8:29197631-29197632(-) m6A CDS       24284625//27773535 chr8:29197654-29197655(-) m6A CDS       24284625//27773535 chr8:29197712-29197713(-) m6A CDS       24284625//27773535 chr8:29202965-29202966(-) m6A CDS//intron       - chr8:29202972-29202973(-) m6A CDS//intron       - chr8:29202982-29202983(-) m6A CDS//intron       - chr8:29203004-29203005(-) m6A CDS//intron       - chr8:29203103-29203104(-) m6A 5'UTR//intron       24981863 chr8:29203112-29203113(-) m6A 5'UTR//intron       24981863 chr8:29203188-29203189(-) m6A 5'UTR//intron       24981863 chr8:29203256-29203257(-) m6A 5'UTR//intron       24981863 chr8:29203409-29203410(-) m6A 5'UTR//intron       24981863 chr8:29206312-29206313(-) m6A 5'UTR//intron       - chr8:29207433-29207434(-) m6A CDS       - chr8:29207642-29207643(-) m6A CDS       24284625//25456834//24981863//28052920//26404942//27371828//27773536//22575960 chr8:29207649-29207650(-) m6A CDS       24284625//25456834//24981863//28052920//26404942//27371828//27773536//22575960 chr8:29207736-29207737(-) m6A CDS       24284625//25456834//24981863//28052920//26404942//27371828//27773536//22575960 chr8:29207763-29207764(-) m6A CDS       24284625//25456834//24981863//28052920//26404942//27371828//27773536 chr8:29207918-29207919(-) m6A 5'UTR       24284625//25456834//24981863//28052920//27371828//27773536 chr8:29207947-29207948(-) m1A 5'UTR       26863196 chr8:29207956-29207957(-) m6A 5'UTR       24284625//25456834//24981863//28052920//27371828//27773536 chr8:29208064-29208065(-) m6A 5'UTR       24981863//27371828//27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	DUSP4	Exosome Blood     -

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	hiv1-miR-N367	Topotecan       60700

Interaction Network (The top 100 interactions):

Interactor1: hiv1-miR-N367
Interactor2: DUSP4

Evidence Support:

Prediction-Evidence	miRanda//PITA//Targetscan
Support Database	VmiReg