Detail Information

Basic Information:


  VIRBase ID:  

VHID00683654

  Virus:  

Human immunodeficiency virus 1 (HIV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hiv1-miR-N367:           ADPRH:      

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Interactor Information:


Interactor1 Interactor2
Symbol hiv1-miR-N367 ADPRH
miRBase
Accession/Entrez ID
MIMAT0004478 141
Organism Human immunodeficiency virus 1 (HIV-1) Homo sapiens
Category miRNA mRNA
Alias - ARH1//hARH1

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR ADPRH
chr3:119303362(+) A-I      intronic
chr3:119303299(+) A-I      intronic
chr3:119303290(+) A-I      intronic
chr3:119303274(+) A-I      intronic
chr3:119303258(+) A-I      intronic
chr3:119302774(+) A-I      intronic
chr3:119302764(+) A-I      intronic
chr3:119302724(+) A-I      intronic
chr3:119302718(+) A-I      intronic
chr3:119302705(+) A-I      intronic
chr3:119301526(+) A-I      intronic
chr3:119300070(+) A-I      intronic
chr3:119301466(+) A-I      intronic
chr3:119303263(+) A-I      intronic
chr3:119303400(+) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED ADPRH
chr3:119302024(+) T-C intron -    22484847
chr3:119302042(+) T-C intron -    22484847
chr3:119303263(+) A-G intron -    22484847
chr3:119303288(+) T-C intron -    22484847
chr3:119303328(+) T-C intron -    22484847
chr3:119304535(+) T-C intron -    22484847
chr3:119304561(+) T-C intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ADPRH
chr3:119298573-119298574(+) m6A 5'UTR//exon       24981863
chr3:119299165-119299166(+) m6A 5'UTR//intron       -
chr3:119299218-119299219(+) m6A 5'UTR//intron       -
chr3:119299471-119299472(+) m6A 5'UTR//intron       -
chr3:119299476-119299477(+) m6A 5'UTR//intron       -
chr3:119300980-119300981(+) m6A 5'UTR//intron       -
chr3:119301012-119301013(+) m6A 5'UTR//intron       -
chr3:119301281-119301282(+) m6A CDS//intron       -
chr3:119301293-119301294(+) m6A CDS//intron       -
chr3:119305278-119305279(+) m6A CDS//exon       -
chr3:119305390-119305391(+) m6A CDS//exon       -
chr3:119305414-119305415(+) m6A CDS//exon       -
chr3:119306323-119306324(+) m6A CDS//exon       -
chr3:119306346-119306347(+) m6A CDS//exon       -
chr3:119306510-119306511(+) m6A CDS//exon       -
chr3:119306555-119306556(+) m6A CDS//exon       -
chr3:119306640-119306641(+) m6A CDS//exon       -
chr3:119306654-119306655(+) m6A CDS//exon       -
chr3:119308496-119308497(+) m6A 3'UTR       -
chr3:119308585-119308586(+) m6A 3'UTR       -
chr3:119308593-119308594(+) m6A 3'UTR       -
chr3:119308609-119308610(+) m6A 3'UTR       -
chr3:119308740-119308741(+) m6A 3'UTR       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ADPRH
Exosome Blood     -

Related Drug Information:


Resource Symbol Drug Name PubChem ID
RNAactDrug hiv1-miR-N367
Topotecan       60700

Interaction Network (The top 100 interactions):


Interactor1: hiv1-miR-N367
Interactor2: ADPRH

Evidence Support:


Prediction-Evidence cRep//miRanda//PITA
Support Database RepTar//VmiReg

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