Basic Information:

  VIRBase ID:  

VHID00683489

  Virus:  

Merkel cell polyomavirus

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcpv-miR-P1-3p:  MIMAT0010151          SPRN:  NM_001012508     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcpv-miR-P1-3p	SPRN
miRBase Accession/Entrez ID	MIMAT0010151	503542
Organism	Merkel cell polyomavirus	Homo sapiens
Category	miRNA	mRNA
Alias	-	bA108K14.1//SHADOO//SHO

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	SPRN	chr10:135250554(-) A-I      intronic chr10:135250553(-) A-I      intronic chr10:135241436(-) A-I      intronic chr10:135250531(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SPRN	chr10:135234183-135234184(-) m6A 3'UTR       24981863//22608085 chr10:135234279-135234280(-) m6A 3'UTR       24284625//24981863//22608085 chr10:135234469-135234470(-) m6A 3'UTR       24284625//22608085 chr10:135234482-135234483(-) m6A 3'UTR       24284625//22608085 chr10:135234831-135234832(-) m6A 3'UTR       22575960 chr10:135234883-135234884(-) m6A 3'UTR       22575960 chr10:135234945-135234946(-) m6A 3'UTR       24284625 chr10:135235294-135235295(-) m6A 3'UTR       22608085 chr10:135235308-135235309(-) m6A 3'UTR       22608085 chr10:135235317-135235318(-) m6A 3'UTR       25456834//24981863//22608085 chr10:135235347-135235348(-) m6A 3'UTR       25456834//24981863//22608085 chr10:135235367-135235368(-) m6A 3'UTR       25456834//22608085 chr10:135235544-135235545(-) m6A 3'UTR       25456834//24981863//22608085 chr10:135235560-135235561(-) m6A 3'UTR       25456834//24981863 chr10:135235578-135235579(-) m6A 3'UTR       25456834//24981863 chr10:135235593-135235594(-) m6A 3'UTR       25456834//24981863 chr10:135235610-135235611(-) m6A 3'UTR       25456834 chr10:135235619-135235620(-) m6A 3'UTR       25456834 chr10:135235657-135235658(-) m6A 3'UTR       25456834 chr10:135235705-135235706(-) m6A 3'UTR       - chr10:135235776-135235777(-) m6A 3'UTR       24284625 chr10:135235940-135235941(-) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr10:135235974-135235975(-) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr10:135235994-135235995(-) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr10:135236018-135236019(-) m6A 3'UTR       24284625//25456834//24981863//22608085 chr10:135236043-135236044(-) m6A 3'UTR       24284625//25456834//24981863//22608085 chr10:135236110-135236111(-) m6A 3'UTR       24284625//25456834//24981863//22608085 chr10:135236160-135236161(-) m6A 3'UTR       24284625//25456834//24981863//22608085 chr10:135236178-135236179(-) m6A 3'UTR       24284625//25456834//22608085 chr10:135236259-135236260(-) m6A 3'UTR       24284625//25456834 chr10:135236267-135236268(-) m6A 3'UTR       25456834 chr10:135236399-135236400(-) m6A 3'UTR       - chr10:135236530-135236531(-) m6A 3'UTR       - chr10:135236589-135236590(-) m6A 3'UTR       - chr10:135236710-135236711(-) m6A 3'UTR       - chr10:135236801-135236802(-) m6A CDS       - chr10:135236815-135236816(-) m6A CDS       - chr10:135236848-135236849(-) m6A CDS       - chr10:135236903-135236904(-) m6A CDS       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SPRN	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: mcpv-miR-P1-3p
Interactor2: SPRN

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//Targetscan
Support Database	RepTar//VmiReg