Basic Information:

  VIRBase ID:  

VHID00683417

  Virus:  

Merkel cell polyomavirus

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcpv-miR-P1-3p:  MIMAT0010151          FAM180A:  NM_001369697     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcpv-miR-P1-3p	FAM180A
miRBase Accession/Entrez ID	MIMAT0010151	389558
Organism	Merkel cell polyomavirus	Homo sapiens
Category	miRNA	mRNA
Alias	-	UNQ1940

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	FAM180A	chr7:135415107(-) A-I      intronic chr7:135415110(-) A-I      intronic chr7:135415124(-) A-I      intronic chr7:135415162(-) A-I      intronic chr7:135415170(-) A-I      intronic chr7:135415168(-) A-I      intronic chr7:135418289(-) A-I      intronic chr7:135418263(-) A-I      intronic chr7:135417197(-) A-I      intronic chr7:135415183(-) A-I      intronic chr7:135415265(-) A-I      intronic chr7:135426540(-) A-I      intronic chr7:135415209(-) A-I      intronic chr7:135415217(-) A-I      intronic chr7:135418294(-) A-I      intronic chr7:135418277(-) A-I      intronic chr7:135418264(-) A-I      intronic chr7:135418271(-) A-I      intronic chr7:135418265(-) A-I      intronic chr7:135417319(-) A-I      intronic chr7:135415157(-) A-I      intronic chr7:135418241(-) A-I      intronic chr7:135418223(-) A-I      intronic chr7:135418187(-) A-I      intronic chr7:135418180(-) A-I      intronic chr7:135418171(-) A-I      intronic chr7:135418206(-) A-I      intronic chr7:135417379(-) A-I      intronic chr7:135417341(-) A-I      intronic chr7:135417332(-) A-I      intronic chr7:135415164(-) A-I      intronic chr7:135417223(-) A-I      intronic chr7:135415208(-) A-I      intronic chr7:135417284(-) A-I      intronic chr7:135415197(-) A-I      intronic chr7:135418262(-) A-I      intronic chr7:135417273(-) A-I      intronic chr7:135418233(-) A-I      intronic chr7:135415044(-) A-I      intronic chr7:135417236(-) A-I      intronic chr7:135418296(-) A-I      intronic chr7:135415073(-) A-I      intronic chr7:135417206(-) A-I      intronic chr7:135415087(-) A-I      intronic chr7:135418273(-) A-I      intronic chr7:135418298(-) A-I      intronic chr7:135418274(-) A-I      intronic chr7:135418283(-) A-I      intronic chr7:135417394(-) A-I      intronic chr7:135415184(-) A-I      intronic chr7:135417358(-) A-I      intronic chr7:135417224(-) A-I      intronic chr7:135418239(-) A-I      intronic chr7:135417293(-) A-I      intronic chr7:135418232(-) A-I      intronic chr7:135417238(-) A-I      intronic chr7:135417258(-) A-I      intronic chr7:135418272(-) A-I      intronic chr7:135418259(-) A-I      intronic chr7:135417237(-) A-I      intronic chr7:135418219(-) A-I      intronic chr7:135417275(-) A-I      intronic chr7:135417278(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	FAM180A	chr7:135418550-135418551(-) m6A 3'UTR//intron       - chr7:135418593-135418594(-) m6A 3'UTR//intron       - chr7:135418627-135418628(-) m6A 3'UTR//intron       - chr7:135418639-135418640(-) m6A 3'UTR//intron       - chr7:135418688-135418689(-) m6A 3'UTR//intron       - chr7:135418702-135418703(-) m6A 3'UTR//intron       - chr7:135418718-135418719(-) m6A 3'UTR//intron       - chr7:135418807-135418808(-) m6A CDS//intron       -

Interaction Network (The top 100 interactions):

Interactor1: mcpv-miR-P1-3p
Interactor2: FAM180A

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//Targetscan
Support Database	RepTar//VmiReg