Basic Information:

  VIRBase ID:  

VHID00683347

  Virus:  

Merkel cell polyomavirus

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcpv-miR-P1-3p:  MIMAT0010151          SLC35B2:  NM_001286520     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcpv-miR-P1-3p	SLC35B2
miRBase Accession/Entrez ID	MIMAT0010151	347734
Organism	Merkel cell polyomavirus	Homo sapiens
Category	miRNA	mRNA
Alias	-	PAPST1//SLL//UGTrel4

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SLC35B2	chr6:44222406-44222407(-) m6A 3'UTR//exon       24284625 chr6:44222759-44222760(-) m6A 3'UTR//CDS//exon       24284625//25456834//24981863//27773535//22575960//22608085 chr6:44222781-44222782(-) m6A 3'UTR//CDS//exon       24284625//25456834//24981863//27773535//22575960//22608085 chr6:44222881-44222882(-) m6A 3'UTR//CDS//exon       24284625//25456834//24981863//22575960//22608085 chr6:44222967-44222968(-) m6A 3'UTR//CDS//exon       24284625//25456834//24981863//27773535//22575960//22608085 chr6:44223033-44223034(-) m6A 3'UTR//CDS//exon       24284625//25456834//24981863//27773535//22575960//22608085 chr6:44223265-44223266(-) m6A 3'UTR//CDS//exon       24284625//25456834//24981863//28052920//26404942//27773535//22575960//22608085 chr6:44223289-44223290(-) m6A 3'UTR//CDS//exon       24284625//25456834//24981863//28052920//26404942//27773535//22575960//22608085 chr6:44224131-44224132(-) m6A CDS//exon//intron       24284625 chr6:44224146-44224147(-) m6A CDS//exon//intron       24284625 chr6:44224424-44224425(-) m6A CDS//intron       24284625 chr6:44224435-44224436(-) m6A CDS//intron       24284625 chr6:44224451-44224452(-) Y CDS//intron       26075521 chr6:44224559-44224560(-) m6A 5'UTR//CDS//intron       27773536 chr6:44225149-44225150(-) m6A 5'UTR//exon//intron       24981863//27371828//27773536 chr6:44225190-44225191(-) m6A 5'UTR//exon//intron       24981863//27371828//27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SLC35B2	Chromatin K562 cells     - Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus K562 cells     - Ribosome HEK-293 cells     22199352 Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: mcpv-miR-P1-3p
Interactor2: SLC35B2

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//Targetscan
Support Database	RepTar//VmiReg