Basic Information:

  VIRBase ID:  

VHID00683295

  Virus:  

Merkel cell polyomavirus

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcpv-miR-P1-3p:  MIMAT0010151          TMEM119:  NM_181724     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcpv-miR-P1-3p	TMEM119
miRBase Accession/Entrez ID	MIMAT0010151	338773
Organism	Merkel cell polyomavirus	Homo sapiens
Category	miRNA	mRNA
Alias	-	OBIF

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	TMEM119	chr12:108984329(-) A-I      3'UTR chr12:108984310(-) A-I      3'UTR chr12:108984293(-) A-I      3'UTR chr12:108984290(-) A-I      3'UTR chr12:108984307(-) A-I      3'UTR chr12:108984351(-) A-I      3'UTR chr12:108984229(-) A-I      3'UTR chr12:108984227(-) A-I      3'UTR chr12:108984918(-) A-I      3'UTR chr12:108984973(-) A-I      3'UTR chr12:108984972(-) A-I      3'UTR chr12:108984938(-) A-I      3'UTR chr12:108984928(-) A-I      3'UTR chr12:108984904(-) A-I      3'UTR chr12:108984451(-) A-I      3'UTR chr12:108987173(-) A-I      intronic chr12:108984979(-) A-I      3'UTR chr12:108984981(-) A-I      3'UTR chr12:108984228(-) A-I      3'UTR chr12:108984215(-) A-I      3'UTR

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	TMEM119	chr12:108984979(-) A-I exon 3'UTR    21960545 chr12:108984979(-) A-G exon 3'UTR    22484847 chr12:108984981(-) A-G exon 3'UTR    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TMEM119	chr12:108984942-108984943(-) m6A 3'UTR       - chr12:108985009-108985010(-) m6A 3'UTR       - chr12:108985364-108985365(-) m6A CDS       - chr12:108985477-108985478(-) m6A CDS       25456834 chr12:108985496-108985497(-) m6A CDS       25456834 chr12:108985512-108985513(-) m6A CDS       25456834 chr12:108985614-108985615(-) m6A CDS       25456834 chr12:108985743-108985744(-) m6A CDS       - chr12:108985893-108985894(-) m6A CDS       - chr12:108985984-108985985(-) m6A CDS       - chr12:108987992-108987993(-) m6A 5'UTR//intron       - chr12:108991748-108991749(-) m6A 5'UTR       - chr12:108991822-108991823(-) m6A 5'UTR//intron       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	TMEM119	Chromatin K562 cells     - Cytoplasm Nasopharyngeal carcinoma cells     20498841 Exosome Blood     - Nucleus Nasopharyngeal carcinoma cells     20498841

Interaction Network (The top 100 interactions):

Interactor1: mcpv-miR-P1-3p
Interactor2: TMEM119

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//Targetscan
Support Database	RepTar//VmiReg