Basic Information:

  VIRBase ID:  

VHID00683208

  Virus:  

Merkel cell polyomavirus

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcpv-miR-P1-3p:  MIMAT0010151          PGM2L1:  NM_173582     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcpv-miR-P1-3p	PGM2L1
miRBase Accession/Entrez ID	MIMAT0010151	283209
Organism	Merkel cell polyomavirus	Homo sapiens
Category	miRNA	mRNA
Alias	-	BM32A//PMMLP

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	PGM2L1	chr11:74090963(-) A-I      intronic chr11:74093723(-) A-I      intronic chr11:74093720(-) A-I      intronic chr11:74093763(-) A-I      intronic chr11:74093740(-) A-I      intronic chr11:74100959(-) A-I      intronic chr11:74100297(-) A-I      intronic chr11:74093586(-) A-I      intronic chr11:74080814(-) A-I      intronic chr11:74071228(-) A-I      intronic chr11:74100215(-) A-I      intronic chr11:74100298(-) A-I      intronic chr11:74100606(-) A-I      intronic chr11:74100617(-) A-I      intronic chr11:74088373(-) A-I      intronic chr11:74106724(-) A-I      intronic chr11:74100631(-) A-I      intronic chr11:74090724(-) A-I      intronic chr11:74092780(-) A-I      intronic chr11:74042563(-) A-I      3'UTR chr11:74046172(-) A-I      3'UTR chr11:74046259(-) A-I      3'UTR chr11:74093817(-) A-I      intronic chr11:74106555(-) A-I      intronic chr11:74100188(-) A-I      intronic chr11:74067906(-) A-I      intronic chr11:74093775(-) A-I      intronic chr11:74107598(-) A-I      intronic chr11:74100784(-) A-I      intronic chr11:74107182(-) A-I      intronic chr11:74092769(-) A-I      intronic chr11:74100630(-) A-I      intronic chr11:74107731(-) A-I      intronic chr11:74054962(-) A-I      intronic chr11:74092721(-) A-I      intronic chr11:74093752(-) A-I      intronic chr11:74042580(-) A-I      3'UTR

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	PGM2L1	chr11:74102838(-) A-I intron -    21960545

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PGM2L1	chr11:74044511-74044512(-) m6A 3'UTR       24981863 chr11:74044568-74044569(-) m6A 3'UTR       24981863 chr11:74044793-74044794(-) m6A 3'UTR       24981863//27773535 chr11:74044806-74044807(-) m6A 3'UTR       24981863//27773535 chr11:74044823-74044824(-) m6A 3'UTR       24981863//27773535 chr11:74044896-74044897(-) m6A 3'UTR       24981863//27773535 chr11:74044943-74044944(-) m6A 3'UTR       27773535 chr11:74047537-74047538(-) m6A 3'UTR       24284625 chr11:74047542-74047543(-) m6A 3'UTR       24284625//24981863//27773535 chr11:74047626-74047627(-) m6A 3'UTR       24284625//24981863//26404942//27773535//22608085 chr11:74047640-74047641(-) m6A 3'UTR       24284625//24981863//26404942//27773535//22608085 chr11:74047655-74047656(-) m6A 3'UTR       24284625//24981863//26404942//27773535//22608085 chr11:74047717-74047718(-) m6A CDS       24284625//24981863//26404942//27773535//27371828//22608085 chr11:74047765-74047766(-) m6A CDS       24284625//24981863//26404942//27773535//27371828//22608085 chr11:74047774-74047775(-) m6A CDS       24284625//24981863//26404942//27773535//27371828//22608085 chr11:74054028-74054029(-) Am CDS       - chr11:74109195-74109196(-) m6A CDS//exon       27371828 chr11:74109275-74109276(-) m6A 5'UTR//exon       27371828//27773536 chr11:74109289-74109290(-) m6A 5'UTR//exon       24981863//27371828//27773536 chr11:74109339-74109340(-) m6A 5'UTR//exon       24981863//27371828//27773536 chr11:74109386-74109387(-) m6A 5'UTR//exon       24981863//27371828//27773536 chr11:74109417-74109418(-) m6A 5'UTR//exon       24981863//27371828//27773536 chr11:74109423-74109424(-) m6A 5'UTR//exon       24981863//27371828//27773536 chr11:74109470-74109471(-) m6A 5'UTR       24981863//27371828 chr11:74109479-74109480(-) m6A 5'UTR       24981863//27371828 chr11:74109485-74109486(-) m6A 5'UTR       24981863//27371828

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	PGM2L1	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: mcpv-miR-P1-3p
Interactor2: PGM2L1

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//Targetscan
Support Database	RepTar//VmiReg