Basic Information:

  VIRBase ID:  

VHID00683155

  Virus:  

Merkel cell polyomavirus

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcpv-miR-P1-3p:  MIMAT0010151          ATXN7L1:  NM_152749     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcpv-miR-P1-3p	ATXN7L1
miRBase Accession/Entrez ID	MIMAT0010151	222255
Organism	Merkel cell polyomavirus	Homo sapiens
Category	miRNA	mRNA
Alias	-	ATXN7L4

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ATXN7L1	chr7:105388501(-) A-I      intronic chr7:105286688(-) A-I      intronic chr7:105385322(-) A-I      intronic chr7:105385321(-) A-I      intronic chr7:105385316(-) A-I      intronic chr7:105385280(-) A-I      intronic chr7:105500305(-) A-I      intronic chr7:105381308(-) A-I      intronic chr7:105500314(-) A-I      intronic chr7:105286689(-) A-I      intronic chr7:105381271(-) A-I      intronic chr7:105372783(-) A-I      intronic chr7:105502689(-) A-I      intronic chr7:105372773(-) A-I      intronic chr7:105372018(-) A-I      intronic chr7:105371973(-) A-I      intronic chr7:105510560(-) A-I      intronic chr7:105361211(-) A-I      intronic chr7:105361118(-) A-I      intronic chr7:105360797(-) A-I      intronic chr7:105286694(-) A-I      intronic chr7:105382397(-) A-I      intronic chr7:105382414(-) A-I      intronic chr7:105355460(-) A-I      intronic chr7:105355448(-) A-I      intronic chr7:105286695(-) A-I      intronic chr7:105360788(-) A-I      intronic chr7:105286700(-) A-I      intronic chr7:105357711(-) A-I      intronic chr7:105308805(-) A-I      intronic chr7:105357714(-) A-I      intronic chr7:105357734(-) A-I      intronic chr7:105349596(-) A-I      intronic chr7:105357738(-) A-I      intronic chr7:105357741(-) A-I      intronic chr7:105298633(-) A-I      intronic chr7:105357742(-) A-I      intronic chr7:105299184(-) A-I      intronic chr7:105299334(-) A-I      intronic chr7:105382417(-) A-I      intronic chr7:105357743(-) A-I      intronic chr7:105286675(-) A-I      intronic chr7:105345690(-) A-I      intronic chr7:105309732(-) A-I      intronic chr7:105309729(-) A-I      intronic chr7:105453212(-) A-I      intronic chr7:105453229(-) A-I      intronic chr7:105309667(-) A-I      intronic chr7:105299345(-) A-I      intronic chr7:105299346(-) A-I      intronic chr7:105453230(-) A-I      intronic chr7:105309653(-) A-I      intronic chr7:105309634(-) A-I      intronic chr7:105299444(-) A-I      intronic chr7:105251854(-) A-I      intronic chr7:105299502(-) A-I      intronic chr7:105265010(-) A-I      intronic chr7:105265028(-) A-I      intronic chr7:105265034(-) A-I      intronic chr7:105271074(-) A-I      intronic chr7:105287309(-) A-I      intronic chr7:105299527(-) A-I      intronic chr7:105299532(-) A-I      intronic chr7:105299562(-) A-I      intronic chr7:105308827(-) A-I      intronic chr7:105287329(-) A-I      intronic chr7:105453275(-) A-I      intronic chr7:105293838(-) A-I      intronic chr7:105302567(-) A-I      intronic chr7:105302588(-) A-I      intronic chr7:105382430(-) A-I      intronic chr7:105427187(-) A-I      intronic chr7:105427188(-) A-I      intronic chr7:105427207(-) A-I      intronic chr7:105427220(-) A-I      intronic chr7:105427233(-) A-I      intronic chr7:105427236(-) A-I      intronic chr7:105427240(-) A-I      intronic chr7:105458874(-) A-I      intronic chr7:105458884(-) A-I      intronic chr7:105364898(-) A-I      intronic chr7:105392068(-) A-I      intronic chr7:105502758(-) A-I      intronic chr7:105511970(-) A-I      intronic chr7:105412631(-) A-I      intronic chr7:105427098(-) A-I      intronic chr7:105372759(-) A-I      intronic chr7:105427089(-) A-I      intronic chr7:105424500(-) A-I      intronic chr7:105412723(-) A-I      intronic chr7:105412708(-) A-I      intronic chr7:105412702(-) A-I      intronic chr7:105412697(-) A-I      intronic chr7:105412693(-) A-I      intronic chr7:105412690(-) A-I      intronic chr7:105286514(-) A-I      intronic chr7:105412685(-) A-I      intronic chr7:105412658(-) A-I      intronic chr7:105412652(-) A-I      intronic chr7:105412644(-) A-I      intronic chr7:105286515(-) A-I      intronic chr7:105286529(-) A-I      intronic chr7:105286537(-) A-I      intronic chr7:105286538(-) A-I      intronic chr7:105487331(-) A-I      intronic chr7:105286476(-) A-I      intronic chr7:105286541(-) A-I      intronic chr7:105286542(-) A-I      intronic chr7:105302618(-) A-I      intronic chr7:105411506(-) A-I      intronic chr7:105411502(-) A-I      intronic chr7:105411497(-) A-I      intronic chr7:105411471(-) A-I      intronic chr7:105411463(-) A-I      intronic chr7:105411373(-) A-I      intronic chr7:105398282(-) A-I      intronic chr7:105391247(-) A-I      intronic chr7:105391202(-) A-I      intronic chr7:105391186(-) A-I      intronic chr7:105390886(-) A-I      intronic chr7:105493967(-) A-I      intronic chr7:105390846(-) A-I      intronic chr7:105390845(-) A-I      intronic chr7:105286674(-) A-I      intronic chr7:105390833(-) A-I      intronic chr7:105388504(-) A-I      intronic chr7:105505169(-) A-I      intronic chr7:105512499(-) A-I      intronic chr7:105425800(-) A-I      intronic chr7:105500357(-) A-I      intronic chr7:105512609(-) A-I      intronic chr7:105335394(-) A-I      intronic chr7:105372612(-) A-I      intronic chr7:105512644(-) A-I      intronic chr7:105272202(-) A-I      intronic chr7:105335596(-) A-I      intronic chr7:105512675(-) A-I      intronic chr7:105369492(-) A-I      intronic chr7:105391223(-) A-I      intronic chr7:105512511(-) A-I      intronic chr7:105512704(-) A-I      intronic chr7:105372503(-) A-I      intronic chr7:105425812(-) A-I      intronic chr7:105369711(-) A-I      intronic chr7:105504780(-) A-I      intronic chr7:105512506(-) A-I      intronic chr7:105512653(-) A-I      intronic chr7:105512667(-) A-I      intronic chr7:105512577(-) A-I      intronic chr7:105411403(-) A-I      intronic chr7:105512643(-) A-I      intronic chr7:105512619(-) A-I      intronic chr7:105500321(-) A-I      intronic chr7:105390920(-) A-I      intronic chr7:105372611(-) A-I      intronic chr7:105512610(-) A-I      intronic chr7:105341371(-) A-I      intronic chr7:105427160(-) A-I      intronic chr7:105512618(-) A-I      intronic chr7:105512711(-) A-I      intronic chr7:105493836(-) A-I      intronic chr7:105297085(-) A-I      intronic chr7:105411483(-) A-I      intronic chr7:105512515(-) A-I      intronic chr7:105299046(-) A-I      intronic chr7:105512824(-) A-I      intronic chr7:105411441(-) A-I      intronic chr7:105298043(-) A-I      intronic chr7:105512522(-) A-I      intronic chr7:105371066(-) A-I      intronic chr7:105372417(-) A-I      intronic chr7:105512583(-) A-I      intronic chr7:105309657(-) A-I      intronic chr7:105458198(-) A-I      intronic chr7:105357202(-) A-I      intronic chr7:105357263(-) A-I      intronic chr7:105504835(-) A-I      intronic chr7:105369648(-) A-I      intronic chr7:105299396(-) A-I      intronic chr7:105299185(-) A-I      intronic chr7:105357861(-) A-I      intronic chr7:105513356(-) A-I      intronic chr7:105502844(-) A-I      intronic chr7:105338972(-) A-I      intronic chr7:105357792(-) A-I      intronic chr7:105398309(-) A-I      intronic chr7:105332962(-) A-I      intronic chr7:105345154(-) A-I      intronic chr7:105496955(-) A-I      intronic chr7:105297942(-) A-I      intronic chr7:105390929(-) A-I      intronic chr7:105395105(-) A-I      intronic chr7:105357093(-) A-I      intronic chr7:105295234(-) A-I      intronic chr7:105493833(-) A-I      intronic chr7:105268095(-) A-I      intronic chr7:105286508(-) A-I      intronic chr7:105500499(-) A-I      intronic chr7:105357104(-) A-I      intronic chr7:105286644(-) A-I      intronic chr7:105372492(-) A-I      intronic chr7:105275270(-) A-I      intronic chr7:105345149(-) A-I      intronic chr7:105504897(-) A-I      intronic chr7:105299160(-) A-I      intronic chr7:105371011(-) A-I      intronic chr7:105302730(-) A-I      intronic chr7:105417258(-) A-I      intronic chr7:105422487(-) A-I      intronic chr7:105350416(-) A-I      intronic chr7:105366308(-) A-I      intronic chr7:105372737(-) A-I      intronic chr7:105299189(-) A-I      intronic chr7:105462666(-) A-I      intronic chr7:105417294(-) A-I      intronic chr7:105299472(-) A-I      intronic chr7:105299548(-) A-I      intronic chr7:105365422(-) A-I      intronic chr7:105309792(-) A-I      intronic chr7:105505353(-) A-I      intronic chr7:105272091(-) A-I      intronic chr7:105293853(-) A-I      intronic chr7:105398167(-) A-I      intronic chr7:105271086(-) A-I      intronic chr7:105398308(-) A-I      intronic chr7:105453332(-) A-I      intronic chr7:105417392(-) A-I      intronic chr7:105462681(-) A-I      intronic chr7:105412795(-) A-I      intronic chr7:105390890(-) A-I      intronic chr7:105365428(-) A-I      intronic chr7:105309440(-) A-I      intronic chr7:105302579(-) A-I      intronic chr7:105392043(-) A-I      intronic chr7:105274098(-) A-I      intronic chr7:105335571(-) A-I      intronic chr7:105364981(-) A-I      intronic chr7:105304393(-) A-I      intronic chr7:105286932(-) A-I      intronic chr7:105422441(-) A-I      intronic chr7:105394912(-) A-I      intronic chr7:105295433(-) A-I      intronic chr7:105398153(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	ATXN7L1	chr7:105512499(-) A-I intron -    22028664 chr7:105512506(-) A-I intron -    22028664 chr7:105512507(-) A-I intron -    22028664 chr7:105512511(-) A-I intron -    22028664 chr7:105512515(-) A-I intron -    22028664 chr7:105512522(-) A-I intron -    22028664 chr7:105512577(-) A-I intron -    22028664 chr7:105512583(-) A-I intron -    22028664 chr7:105512609(-) A-I intron -    22028664 chr7:105512610(-) A-I intron -    22028664 chr7:105512618(-) A-I intron -    22028664 chr7:105512619(-) A-I intron -    22028664 chr7:105512643(-) A-I intron -    22028664 chr7:105512644(-) A-I intron -    22028664 chr7:105512653(-) A-I intron -    22028664 chr7:105512667(-) A-I intron -    22028664 chr7:105512675(-) A-I intron -    22028664 chr7:105512704(-) A-I intron -    22028664 chr7:105512711(-) A-I intron -    22028664 chr7:105512824(-) A-I intron -    22028664

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ATXN7L1	chr7:105245692-105245693(-) m6A 3'UTR       27773535 chr7:105245710-105245711(-) m6A 3'UTR       27773535 chr7:105245888-105245889(-) m6A 3'UTR       27773535 chr7:105245983-105245984(-) m6A 3'UTR       24981863//27773535 chr7:105246010-105246011(-) m6A 3'UTR       24981863//27773535 chr7:105246060-105246061(-) m6A 3'UTR       24981863 chr7:105247034-105247035(-) m6A 3'UTR       25456834 chr7:105247061-105247062(-) m6A 3'UTR       25456834//24981863 chr7:105247104-105247105(-) m6A 3'UTR       25456834//24981863 chr7:105247125-105247126(-) m6A 3'UTR       25456834//24981863 chr7:105247154-105247155(-) m6A 3'UTR       25456834//24981863 chr7:105247202-105247203(-) m6A 3'UTR       - chr7:105247262-105247263(-) m6A 3'UTR       - chr7:105247496-105247497(-) m6A 3'UTR       27773535 chr7:105247503-105247504(-) m6A 3'UTR       27773535 chr7:105247563-105247564(-) m6A 3'UTR       27773535 chr7:105247575-105247576(-) m6A 3'UTR       27773535 chr7:105247911-105247912(-) m6A 3'UTR       27773535 chr7:105247958-105247959(-) m6A 3'UTR       27773535 chr7:105248293-105248294(-) m6A 3'UTR       27773535 chr7:105248309-105248310(-) m6A CDS       27773535 chr7:105248329-105248330(-) m6A CDS       27773535 chr7:105248335-105248336(-) m6A CDS       27773535 chr7:105250987-105250988(-) m6A CDS       27773535 chr7:105253948-105253949(-) m6A 3'UTR//intron       27773535 chr7:105254366-105254367(-) m6A 3'UTR//CDS       24981863//27773535 chr7:105254435-105254436(-) m6A 3'UTR//CDS       24284625//25456834//24981863//27773535 chr7:105254513-105254514(-) m6A 3'UTR//CDS       24284625//25456834//24981863//27773535//27371828//22575960//22608085 chr7:105254587-105254588(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr7:105254597-105254598(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr7:105254622-105254623(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr7:105254641-105254642(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr7:105254669-105254670(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr7:105254720-105254721(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//22575960 chr7:105254750-105254751(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535 chr7:105254790-105254791(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535 chr7:105254888-105254889(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535 chr7:105254913-105254914(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535 chr7:105254919-105254920(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535 chr7:105254996-105254997(-) m6A 3'UTR//CDS       24284625//25456834//24981863//27773535//27371828 chr7:105255062-105255063(-) m6A 3'UTR//CDS       24284625//25456834//24981863//27773535 chr7:105258307-105258308(-) m6A CDS//intron       - chr7:105278822-105278823(-) m6A 3'UTR//CDS//exon       27773535 chr7:105278852-105278853(-) m6A 3'UTR//CDS//exon       27773535 chr7:105278987-105278988(-) m6A 3'UTR//CDS//exon       27773535 chr7:105279960-105279961(-) m6A 3'UTR//CDS//exon//intron       24981863 chr7:105279968-105279969(-) m6A 3'UTR//CDS//exon//intron       24981863 chr7:105279993-105279994(-) m6A 3'UTR//CDS//exon//intron       27773535 chr7:105283291-105283292(-) m6A 3'UTR//CDS//exon       27773535 chr7:105283313-105283314(-) m6A 3'UTR//CDS//exon       27773535 chr7:105283333-105283334(-) m6A 3'UTR//CDS//exon       27773535 chr7:105283340-105283341(-) m6A 3'UTR//CDS//exon       27773535 chr7:105283493-105283494(-) m6A 3'UTR//CDS//exon       24284625//27773535 chr7:105289858-105289859(-) m6A 3'UTR//intron       27773535 chr7:105289911-105289912(-) m6A 3'UTR//intron       27773535 chr7:105289941-105289942(-) m6A 3'UTR//intron       27773535 chr7:105305556-105305557(-) m6A CDS//exon       27773535 chr7:105305581-105305582(-) m6A CDS//exon       27773535 chr7:105305648-105305649(-) m6A CDS//exon       24981863//27773535 chr7:105305669-105305670(-) m6A CDS//exon       24981863//27773535 chr7:105305709-105305710(-) m6A CDS//exon       27773535 chr7:105305727-105305728(-) m6A 5'UTR//CDS//exon       27773535 chr7:105401558-105401559(-) m6A 3'UTR//intron       27773535 chr7:105401712-105401713(-) m6A 3'UTR//intron       25456834//24981863//27773535//27371828//22608085 chr7:105401737-105401738(-) m6A 3'UTR//intron       24981863//27773535//27371828//22608085 chr7:105401774-105401775(-) m6A 3'UTR//intron       25456834//27773535//27371828//22608085 chr7:105401862-105401863(-) m6A CDS//intron       27773535 chr7:105401896-105401897(-) m6A CDS//intron       27773535 chr7:105428584-105428585(-) m6A exon//intron       27773535 chr7:105428670-105428671(-) m6A exon//intron       27773535 chr7:105515579-105515580(-) m6A exon//intron       27773535 chr7:105515626-105515627(-) m6A exon//intron       27773535 chr7:105515653-105515654(-) m6A exon//intron       27773535 chr7:105516869-105516870(-) m6A CDS//exon       24981863//27773535//27371828//22608085 chr7:105516949-105516950(-) m6A CDS//exon       24981863//27773535 chr7:105517029-105517030(-) m6A 5'UTR//exon       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ATXN7L1	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)|K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: mcpv-miR-P1-3p
Interactor2: ATXN7L1

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg