Basic Information:

  VIRBase ID:  

VHID00683118

  Virus:  

Merkel cell polyomavirus

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcpv-miR-P1-3p:  MIMAT0010151          AMER3:  NM_001105195     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcpv-miR-P1-3p	AMER3
miRBase Accession/Entrez ID	MIMAT0010151	205147
Organism	Merkel cell polyomavirus	Homo sapiens
Category	miRNA	mRNA
Alias	-	FAM123C

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	AMER3	chr2:131515816(+) A-I      intronic chr2:131524254(+) A-I      3'UTR

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	AMER3	chr2:131519862-131519863(+) m6A CDS       - chr2:131519875-131519876(+) m6A CDS       - chr2:131519905-131519906(+) m6A CDS       - chr2:131519924-131519925(+) m6A CDS       - chr2:131520129-131520130(+) m6A CDS       - chr2:131520150-131520151(+) m6A CDS       - chr2:131520155-131520156(+) m6A CDS       - chr2:131520162-131520163(+) m6A CDS       - chr2:131520210-131520211(+) m6A CDS       - chr2:131520219-131520220(+) m6A CDS       - chr2:131520291-131520292(+) m6A CDS       - chr2:131520300-131520301(+) m6A CDS       - chr2:131520576-131520577(+) m6A CDS       - chr2:131520647-131520648(+) m6A CDS       22575960 chr2:131520657-131520658(+) m6A CDS       22575960 chr2:131520672-131520673(+) m6A CDS       22575960 chr2:131520714-131520715(+) m6A CDS       22575960 chr2:131520826-131520827(+) m6A CDS       - chr2:131520837-131520838(+) m6A CDS       - chr2:131520888-131520889(+) m6A CDS       - chr2:131521418-131521419(+) m6A CDS       - chr2:131521457-131521458(+) m6A CDS       - chr2:131521711-131521712(+) m6A CDS       - chr2:131521743-131521744(+) m6A CDS       25456834 chr2:131521804-131521805(+) m6A CDS       25456834 chr2:131521869-131521870(+) m6A CDS       - chr2:131521896-131521897(+) m6A CDS       - chr2:131521959-131521960(+) m6A CDS       - chr2:131522019-131522020(+) m6A CDS       - chr2:131522097-131522098(+) m6A CDS       - chr2:131522232-131522233(+) m6A 3'UTR       - chr2:131522253-131522254(+) m6A 3'UTR       - chr2:131522293-131522294(+) m6A 3'UTR       - chr2:131522327-131522328(+) m6A 3'UTR       - chr2:131522354-131522355(+) m6A 3'UTR       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	AMER3	Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus Nasopharyngeal carcinoma cells     20498841

Interaction Network (The top 100 interactions):

Interactor1: mcpv-miR-P1-3p
Interactor2: AMER3

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//Targetscan
Support Database	RepTar//VmiReg