Basic Information:

  VIRBase ID:  

VHID00682975

  Virus:  

Merkel cell polyomavirus

  Host:  

Homo sapiens

  Confidence Score:  

0.2494

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcpv-miR-P1-3p:  MIMAT0010151          SLC36A2:  NM_181776     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcpv-miR-P1-3p	SLC36A2
miRBase Accession/Entrez ID	MIMAT0010151	153201
Organism	Merkel cell polyomavirus	Homo sapiens
Category	miRNA	mRNA
Alias	-	PAT2//TRAMD1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	SLC36A2	chr5:150702594(-) A-I      intronic chr5:150702631(-) A-I      intronic chr5:150702656(-) A-I      intronic chr5:150702661(-) A-I      intronic chr5:150702674(-) A-I      intronic chr5:150704275(-) A-I      intronic chr5:150704289(-) A-I      intronic chr5:150711381(-) A-I      intronic chr5:150702593(-) A-I      intronic chr5:150711552(-) A-I      intronic chr5:150711565(-) A-I      intronic chr5:150711549(-) A-I      intronic chr5:150694987(-) A-I      3'UTR chr5:150695063(-) A-I      3'UTR chr5:150694973(-) A-I      3'UTR chr5:150695072(-) A-I      3'UTR chr5:150695066(-) A-I      3'UTR

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SLC36A2	Cytoplasm Nasopharyngeal carcinoma cells     20498841 Nucleus Nasopharyngeal carcinoma cells     20498841

Interaction Network (The top 100 interactions):

Interactor1: mcpv-miR-P1-3p
Interactor2: SLC36A2

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg