Basic Information:

  VIRBase ID:  

VHID00682737

  Virus:  

Merkel cell polyomavirus

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcpv-miR-P1-3p:  MIMAT0010151          MRPL10:  NM_145255     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcpv-miR-P1-3p	MRPL10
miRBase Accession/Entrez ID	MIMAT0010151	124995
Organism	Merkel cell polyomavirus	Homo sapiens
Category	miRNA	mRNA
Alias	-	L10MT//MRP-L10//MRP-L8//MRPL8//RPML8

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	MRPL10	chr17:45907993(-) A-I      intronic chr17:45908088(-) A-I      intronic chr17:45908095(-) A-I      intronic chr17:45907025(-) A-I      5'UTR chr17:45907259(-) A-I      intronic chr17:45907957(-) A-I      intronic chr17:45908040(-) A-I      intronic chr17:45907209(-) A-I      intronic chr17:45907884(-) A-I      intronic chr17:45907133(-) A-I      intronic chr17:45908144(-) A-I      intronic chr17:45907977(-) A-I      intronic chr17:45908099(-) A-I      intronic chr17:45908042(-) A-I      intronic chr17:45907089(-) A-I      intronic chr17:45908010(-) A-I      intronic chr17:45907964(-) A-I      intronic chr17:45907172(-) A-I      intronic chr17:45908036(-) A-I      intronic chr17:45908045(-) A-I      intronic chr17:45907919(-) A-I      intronic chr17:45908085(-) A-I      intronic chr17:45907120(-) A-I      intronic chr17:45907037(-) A-I      5'UTR chr17:45907173(-) A-I      intronic chr17:45906438(-) A-I      intronic chr17:45908153(-) A-I      intronic chr17:45907970(-) A-I      intronic chr17:45908128(-) A-I      intronic chr17:45907143(-) A-I      intronic chr17:45907098(-) A-I      intronic chr17:45906412(-) A-I      intronic chr17:45907063(-) A-I      intronic chr17:45907192(-) A-I      intronic chr17:45907402(-) A-I      intronic chr17:45907208(-) A-I      intronic chr17:45908145(-) A-I      intronic chr17:45908098(-) A-I      intronic chr17:45907169(-) A-I      intronic chr17:45906518(-) A-I      Syn:Val->Val chr17:45908041(-) A-I      intronic chr17:45907980(-) A-I      intronic chr17:45908039(-) A-I      intronic chr17:45908000(-) A-I      intronic chr17:45907131(-) A-I      intronic chr17:45907075(-) A-I      intronic chr17:45908075(-) A-I      intronic chr17:45907117(-) A-I      intronic chr17:45907010(-) A-I      5'UTR chr17:45906998(-) A-I      5'UTR

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	MRPL10	chr17:45906998(-) A-I intron -    15342557   //22028664 chr17:45907037(-) A-I intron -    15342557   //22028664 chr17:45907063(-) A-I intron -    15342557   //22028664 chr17:45907075(-) A-I intron -    15342557   //22028664 chr17:45907133(-) A-I intron -    15342557   //22028664 chr17:45907143(-) A-I intron -    15342557   //22028664 chr17:45907169(-) A-I intron -    15342557   //22028664 chr17:45907172(-) A-I intron -    15342557   //22028664 chr17:45907173(-) A-I intron -    15342557   //22028664 chr17:45907209(-) A-I intron -    15342557   //22028664 chr17:45907259(-) A-I intron -    15342557   //22028664 chr17:45907131(-) A-G intron -    22484847 chr17:45907143(-) A-G intron -    22484847 chr17:45907169(-) A-G intron -    22484847 chr17:45907172(-) A-G intron -    22484847 chr17:45908040(-) A-G intron -    22484847 chr17:45908098(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	MRPL10	chr17:45900867-45900868(-) Am 3'UTR       - chr17:45900985-45900986(-) m6A 3'UTR       22608085 chr17:45901490-45901491(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr17:45901502-45901503(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr17:45901577-45901578(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr17:45901655-45901656(-) m6A 3'UTR//CDS       24284625//24209618//24981863//27773535//22608085 chr17:45901704-45901705(-) m6A 3'UTR//CDS       24284625//24209618//24981863//27773535//22608085 chr17:45904517-45904518(-) m6A 3'UTR//CDS//exon       27773535 chr17:45905917-45905918(-) m6A 3'UTR//CDS//exon       24284625//24981863 chr17:45906015-45906016(-) m6A 3'UTR//CDS//exon       24284625//24981863//27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	MRPL10	Chromatin K562 cells     - Exosome Blood     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: mcpv-miR-P1-3p
Interactor2: MRPL10

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg