Basic Information:

  VIRBase ID:  

VHID00682583

  Virus:  

Merkel cell polyomavirus

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcpv-miR-P1-3p:  MIMAT0010151          ZNF764:  NM_001172679     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcpv-miR-P1-3p	ZNF764
miRBase Accession/Entrez ID	MIMAT0010151	92595
Organism	Merkel cell polyomavirus	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ZNF764	chr16:30565709(-) A-I      3'UTR chr16:30565716(-) A-I      3'UTR chr16:30565954(-) A-I      3'UTR chr16:30565739(-) A-I      3'UTR chr16:30565921(-) A-I      3'UTR chr16:30565669(-) A-I      3'UTR chr16:30565663(-) A-I      3'UTR chr16:30565708(-) A-I      3'UTR chr16:30568551(-) A-I      intronic chr16:30565704(-) A-I      3'UTR chr16:30565752(-) A-I      3'UTR chr16:30565898(-) A-I      3'UTR chr16:30565958(-) A-I      3'UTR chr16:30565994(-) A-I      3'UTR chr16:30565744(-) A-I      3'UTR chr16:30565929(-) A-I      3'UTR chr16:30566040(-) A-I      3'UTR chr16:30565900(-) A-I      3'UTR chr16:30565936(-) A-I      3'UTR chr16:30565980(-) A-I      3'UTR chr16:30565993(-) A-I      3'UTR chr16:30565978(-) A-I      3'UTR chr16:30566019(-) A-I      3'UTR chr16:30565846(-) A-I      3'UTR chr16:30566002(-) A-I      3'UTR chr16:30566016(-) A-I      3'UTR chr16:30565679(-) A-I      3'UTR chr16:30565682(-) A-I      3'UTR chr16:30565750(-) A-I      3'UTR chr16:30566096(-) A-I      3'UTR chr16:30565947(-) A-I      3'UTR chr16:30565858(-) A-I      3'UTR chr16:30565683(-) A-I      3'UTR

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	ZNF764	chr16:30565750(-) A-G exon 3'UTR    21725310 chr16:30566002(-) A-G exon 3'UTR    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ZNF764	chr16:30565404-30565405(-) m6A 3'UTR       27773535 chr16:30565437-30565438(-) m6A 3'UTR       27773535 chr16:30565671-30565672(-) m6A 3'UTR       24981863//27773535//22608085 chr16:30565982-30565983(-) m6A 3'UTR       27773535 chr16:30566053-30566054(-) m6A 3'UTR       24981863//27773535 chr16:30566097-30566098(-) m6A 3'UTR       27773535 chr16:30566144-30566145(-) m6A 3'UTR       27773535 chr16:30566210-30566211(-) m6A 3'UTR       24981863//27773535 chr16:30566226-30566227(-) m6A 3'UTR       24981863//27773535//22608085 chr16:30566263-30566264(-) m6A 3'UTR       24981863//27773535//27371828//22608085 chr16:30566278-30566279(-) m6A 3'UTR       24981863//27773535//27371828//22608085 chr16:30566286-30566287(-) m6A 3'UTR       24981863//27773535//27371828//22608085 chr16:30566390-30566391(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr16:30566453-30566454(-) m6A 3'UTR       24284625//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr16:30566490-30566491(-) m6A 3'UTR       24284625//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr16:30566566-30566567(-) m6A CDS       24284625//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr16:30566572-30566573(-) m6A CDS       24284625//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr16:30566661-30566662(-) m6A CDS       24284625//25456834//24981863//27371828//27773536//22608085 chr16:30566785-30566786(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27371828//27773536//22575960//22608085 chr16:30566839-30566840(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27371828//27773536//22575960//22608085 chr16:30566869-30566870(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27371828//27773536//22575960//22608085 chr16:30566888-30566889(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr16:30566970-30566971(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr16:30567081-30567082(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr16:30567402-30567403(-) m6A CDS//exon       24284625//25456834//27773535//27371828//27773536//22608085 chr16:30567418-30567419(-) m6A CDS//exon       24284625//25456834//27773535//27371828//27773536//22608085 chr16:30569058-30569059(-) m6A CDS//exon       24284625//25456834//27773535//27371828//27773536//22608085 chr16:30569068-30569069(-) m6A CDS//exon       24284625//25456834//27773535//27371828//27773536//22608085 chr16:30569114-30569115(-) m6A CDS//exon       24284625//25456834//27773535//27371828//27773536//22608085 chr16:30569331-30569332(-) m6A CDS//exon       24284625//27773536 chr16:30569452-30569453(-) m6A CDS//exon       24284625//27371828//27773536 chr16:30569468-30569469(-) m6A CDS//exon       24284625//27371828//27773536 chr16:30569788-30569789(-) m6A 5'UTR       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ZNF764	Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleus Nasopharyngeal carcinoma cells     20498841

Interaction Network (The top 100 interactions):

Interactor1: mcpv-miR-P1-3p
Interactor2: ZNF764

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg