Basic Information:

  VIRBase ID:  

VHID00682320

  Virus:  

Merkel cell polyomavirus

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcpv-miR-P1-3p:  MIMAT0010151          CALN1:  NM_001017440     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcpv-miR-P1-3p	CALN1
miRBase Accession/Entrez ID	MIMAT0010151	83698
Organism	Merkel cell polyomavirus	Homo sapiens
Category	miRNA	mRNA
Alias	-	CABP8

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	CALN1	chr7:71861381(-) A-I      intronic chr7:71580677(-) A-I      intronic chr7:71472384(-) A-I      intronic chr7:71812349(-) A-I      intronic chr7:71480999(-) A-I      intronic chr7:71472526(-) A-I      intronic chr7:71580700(-) A-I      intronic chr7:71442841(-) A-I      intronic chr7:71580708(-) A-I      intronic chr7:71873827(-) A-I      intronic chr7:71445056(-) A-I      intronic chr7:71451203(-) A-I      intronic chr7:71873255(-) A-I      intronic chr7:71812348(-) A-I      intronic chr7:71780097(-) A-I      intronic chr7:71718886(-) A-I      intronic chr7:71451197(-) A-I      intronic chr7:71712900(-) A-I      intronic chr7:71443443(-) A-I      intronic chr7:71873875(-) A-I      intronic chr7:71443438(-) A-I      intronic chr7:71873845(-) A-I      intronic chr7:71873842(-) A-I      intronic chr7:71873843(-) A-I      intronic chr7:71347741(-) A-I      intronic chr7:71580649(-) A-I      intronic chr7:71859934(-) A-I      intronic chr7:71859924(-) A-I      intronic chr7:71859775(-) A-I      intronic chr7:71730908(-) A-I      intronic chr7:71472348(-) A-I      intronic chr7:71702107(-) A-I      intronic chr7:71643493(-) A-I      intronic chr7:71436815(-) A-I      intronic chr7:71438269(-) A-I      intronic chr7:71261421(-) A-I      intronic chr7:71286897(-) A-I      intronic chr7:71295532(-) A-I      intronic chr7:71438289(-) A-I      intronic chr7:71631394(-) A-I      intronic chr7:71550225(-) A-I      intronic chr7:71438299(-) A-I      intronic chr7:71305470(-) A-I      intronic chr7:71445011(-) A-I      intronic chr7:71445026(-) A-I      intronic chr7:71451181(-) A-I      intronic chr7:71523441(-) A-I      intronic chr7:71523440(-) A-I      intronic chr7:71523435(-) A-I      intronic chr7:71445034(-) A-I      intronic chr7:71487606(-) A-I      intronic chr7:71580650(-) A-I      intronic chr7:71645690(-) A-I      intronic chr7:71858823(-) A-I      intronic chr7:71295091(-) A-I      intronic chr7:71711812(-) A-I      intronic chr7:71404495(-) A-I      intronic chr7:71446455(-) A-I      intronic chr7:71446579(-) A-I      intronic chr7:71487537(-) A-I      intronic chr7:71446453(-) A-I      intronic chr7:71705320(-) A-I      intronic chr7:71714574(-) A-I      intronic chr7:71462135(-) A-I      intronic chr7:71442417(-) A-I      intronic chr7:71446477(-) A-I      intronic chr7:71736470(-) A-I      intronic chr7:71402532(-) A-I      intronic chr7:71446486(-) A-I      intronic chr7:71358607(-) A-I      intronic chr7:71726568(-) A-I      intronic chr7:71446469(-) A-I      intronic chr7:71563445(-) A-I      intronic chr7:71446527(-) A-I      intronic chr7:71347931(-) A-I      intronic chr7:71538876(-) A-I      intronic chr7:71662758(-) A-I      intronic chr7:71835868(-) A-I      intronic chr7:71486208(-) A-I      intronic chr7:71254145(-) A-I      intronic chr7:71442325(-) A-I      intronic chr7:71717497(-) A-I      intronic chr7:71705248(-) A-I      intronic chr7:71698579(-) A-I      intronic chr7:71738671(-) A-I      intronic chr7:71481681(-) A-I      intronic chr7:71446500(-) A-I      intronic chr7:71396498(-) A-I      intronic chr7:71712871(-) A-I      intronic chr7:71553562(-) A-I      intronic chr7:71434974(-) A-I      intronic chr7:71457505(-) A-I      intronic chr7:71659854(-) A-I      intronic chr7:71481893(-) A-I      intronic chr7:71721259(-) A-I      intronic chr7:71716456(-) A-I      intronic chr7:71326504(-) A-I      intronic chr7:71712824(-) A-I      intronic chr7:71565614(-) A-I      intronic chr7:71780603(-) A-I      intronic chr7:71704296(-) A-I      intronic chr7:71865663(-) A-I      intronic chr7:71475975(-) A-I      intronic chr7:71419098(-) A-I      intronic chr7:71409214(-) A-I      intronic chr7:71682780(-) A-I      intronic chr7:71732959(-) A-I      intronic chr7:71359388(-) A-I      intronic chr7:71779520(-) A-I      intronic chr7:71716585(-) A-I      intronic chr7:71645961(-) A-I      intronic chr7:71337695(-) A-I      intronic chr7:71433982(-) A-I      intronic chr7:71434977(-) A-I      intronic chr7:71857739(-) A-I      intronic chr7:71865588(-) A-I      intronic chr7:71446423(-) A-I      intronic chr7:71405725(-) A-I      intronic chr7:71556253(-) A-I      intronic chr7:71432430(-) A-I      intronic chr7:71269696(-) A-I      intronic chr7:71712823(-) A-I      intronic chr7:71316140(-) A-I      intronic chr7:71664151(-) A-I      intronic chr7:71716482(-) A-I      intronic chr7:71874054(-) A-I      intronic chr7:71718889(-) A-I      intronic chr7:71477492(-) A-I      intronic chr7:71560843(-) A-I      intronic chr7:71443456(-) A-I      intronic chr7:71404286(-) A-I      intronic chr7:71729601(-) A-I      intronic chr7:71419255(-) A-I      intronic chr7:71630424(-) A-I      intronic chr7:71451928(-) A-I      intronic chr7:71783586(-) A-I      intronic chr7:71738642(-) A-I      intronic chr7:71712412(-) A-I      intronic chr7:71411481(-) A-I      intronic chr7:71864420(-) A-I      intronic chr7:71446413(-) A-I      intronic chr7:71288448(-) A-I      intronic chr7:71824770(-) A-I      intronic chr7:71714582(-) A-I      intronic chr7:71419260(-) A-I      intronic chr7:71480485(-) A-I      intronic chr7:71450446(-) A-I      intronic chr7:71254981(-) A-I      intronic chr7:71698595(-) A-I      intronic chr7:71481582(-) A-I      intronic chr7:71253739(-) A-I      intronic chr7:71719837(-) A-I      intronic chr7:71835531(-) A-I      intronic chr7:71662810(-) A-I      intronic chr7:71360231(-) A-I      intronic chr7:71712371(-) A-I      intronic chr7:71556278(-) A-I      intronic chr7:71563668(-) A-I      intronic chr7:71788772(-) A-I      intronic chr7:71445000(-) A-I      intronic chr7:71478419(-) A-I      intronic chr7:71509768(-) A-I      intronic chr7:71388918(-) A-I      intronic chr7:71419106(-) A-I      intronic chr7:71247724(-) A-I      3'UTR chr7:71359401(-) A-I      intronic chr7:71402524(-) A-I      intronic chr7:71857771(-) A-I      intronic chr7:71738723(-) A-I      intronic chr7:71413861(-) A-I      intronic chr7:71712426(-) A-I      intronic chr7:71824767(-) A-I      intronic chr7:71413802(-) A-I      intronic chr7:71779915(-) A-I      intronic chr7:71502421(-) A-I      intronic chr7:71397542(-) A-I      intronic chr7:71686467(-) A-I      intronic chr7:71333534(-) A-I      intronic chr7:71321845(-) A-I      intronic chr7:71681861(-) A-I      intronic chr7:71436807(-) A-I      intronic chr7:71482147(-) A-I      intronic chr7:71475741(-) A-I      intronic chr7:71346813(-) A-I      intronic chr7:71645695(-) A-I      intronic chr7:71736850(-) A-I      intronic chr7:71659439(-) A-I      intronic chr7:71348330(-) A-I      intronic chr7:71686774(-) A-I      intronic chr7:71344999(-) A-I      intronic chr7:71857872(-) A-I      intronic chr7:71713277(-) A-I      intronic chr7:71714730(-) A-I      intronic chr7:71738295(-) A-I      intronic chr7:71630397(-) A-I      intronic chr7:71783588(-) A-I      intronic chr7:71712949(-) A-I      intronic chr7:71713303(-) A-I      intronic chr7:71718864(-) A-I      intronic chr7:71547100(-) A-I      intronic chr7:71822960(-) A-I      intronic chr7:71563454(-) A-I      intronic chr7:71479785(-) A-I      intronic chr7:71712813(-) A-I      intronic chr7:71835787(-) A-I      intronic chr7:71297882(-) A-I      intronic chr7:71631331(-) A-I      intronic chr7:71397285(-) A-I      intronic chr7:71726508(-) A-I      intronic chr7:71481674(-) A-I      intronic chr7:71591013(-) A-I      intronic chr7:71481639(-) A-I      intronic chr7:71481560(-) A-I      intronic chr7:71355834(-) A-I      intronic chr7:71811675(-) A-I      intronic chr7:71706448(-) A-I      intronic chr7:71480563(-) A-I      intronic chr7:71682741(-) A-I      intronic chr7:71779537(-) A-I      intronic chr7:71430104(-) A-I      intronic chr7:71719890(-) A-I      intronic chr7:71698784(-) A-I      intronic chr7:71457615(-) A-I      intronic chr7:71710504(-) A-I      intronic chr7:71713279(-) A-I      intronic chr7:71783594(-) A-I      intronic chr7:71442250(-) A-I      intronic chr7:71780566(-) A-I      intronic chr7:71415020(-) A-I      intronic chr7:71789634(-) A-I      intronic chr7:71684411(-) A-I      intronic chr7:71338239(-) A-I      intronic chr7:71421846(-) A-I      intronic chr7:71475703(-) A-I      intronic chr7:71481677(-) A-I      intronic chr7:71440504(-) A-I      intronic chr7:71712976(-) A-I      intronic chr7:71669112(-) A-I      intronic chr7:71731043(-) A-I      intronic chr7:71662351(-) A-I      intronic chr7:71352515(-) A-I      intronic chr7:71726210(-) A-I      intronic chr7:71738577(-) A-I      intronic chr7:71513297(-) A-I      intronic chr7:71636081(-) A-I      intronic chr7:71716589(-) A-I      intronic chr7:71443531(-) A-I      intronic chr7:71861933(-) A-I      intronic chr7:71529148(-) A-I      intronic chr7:71436761(-) A-I      intronic chr7:71670314(-) A-I      intronic chr7:71272972(-) A-I      intronic chr7:71316161(-) A-I      intronic chr7:71390190(-) A-I      intronic chr7:71479843(-) A-I      intronic chr7:71680548(-) A-I      intronic chr7:71670323(-) A-I      intronic chr7:71260300(-) A-I      intronic chr7:71513910(-) A-I      intronic chr7:71513296(-) A-I      intronic chr7:71349037(-) A-I      intronic chr7:71338153(-) A-I      intronic chr7:71693871(-) A-I      intronic chr7:71462021(-) A-I      intronic chr7:71716483(-) A-I      intronic chr7:71693844(-) A-I      intronic chr7:71281756(-) A-I      intronic chr7:71355931(-) A-I      intronic chr7:71477848(-) A-I      intronic chr7:71812300(-) A-I      intronic chr7:71700003(-) A-I      intronic chr7:71716653(-) A-I      intronic chr7:71858846(-) A-I      intronic chr7:71478365(-) A-I      intronic chr7:71360228(-) A-I      intronic chr7:71486073(-) A-I      intronic chr7:71458335(-) A-I      intronic chr7:71445059(-) A-I      intronic chr7:71442762(-) A-I      intronic chr7:71348359(-) A-I      intronic chr7:71686753(-) A-I      intronic chr7:71435106(-) A-I      intronic chr7:71481920(-) A-I      intronic chr7:71717506(-) A-I      intronic chr7:71404332(-) A-I      intronic chr7:71310062(-) A-I      intronic chr7:71699690(-) A-I      intronic chr7:71462944(-) A-I      intronic chr7:71340114(-) A-I      intronic chr7:71397738(-) A-I      intronic chr7:71629787(-) A-I      intronic chr7:71565304(-) A-I      intronic chr7:71776541(-) A-I      intronic chr7:71733700(-) A-I      intronic chr7:71832929(-) A-I      intronic chr7:71865698(-) A-I      intronic chr7:71352315(-) A-I      intronic chr7:71445269(-) A-I      intronic chr7:71712731(-) A-I      intronic chr7:71548453(-) A-I      intronic chr7:71646655(-) A-I      intronic chr7:71819992(-) A-I      intronic chr7:71472530(-) A-I      intronic chr7:71861132(-) A-I      intronic chr7:71477979(-) A-I      intronic chr7:71779673(-) A-I      intronic chr7:71258179(-) A-I      intronic chr7:71580676(-) A-I      intronic chr7:71721393(-) A-I      intronic chr7:71442416(-) A-I      intronic chr7:71636047(-) A-I      intronic chr7:71738635(-) A-I      intronic chr7:71712830(-) A-I      intronic chr7:71721730(-) A-I      intronic chr7:71781775(-) A-I      intronic chr7:71705459(-) A-I      intronic chr7:71783654(-) A-I      intronic chr7:71442795(-) A-I      intronic chr7:71479155(-) A-I      intronic chr7:71780608(-) A-I      intronic chr7:71781774(-) A-I      intronic chr7:71864460(-) A-I      intronic chr7:71716523(-) A-I      intronic chr7:71712410(-) A-I      intronic chr7:71825865(-) A-I      intronic chr7:71861402(-) A-I      intronic chr7:71700207(-) A-I      intronic chr7:71712930(-) A-I      intronic chr7:71562575(-) A-I      intronic chr7:71565295(-) A-I      intronic chr7:71321864(-) A-I      intronic chr7:71355846(-) A-I      intronic chr7:71480688(-) A-I      intronic chr7:71458343(-) A-I      intronic chr7:71436783(-) A-I      intronic chr7:71446556(-) A-I      intronic chr7:71591004(-) A-I      intronic chr7:71705242(-) A-I      intronic chr7:71711921(-) A-I      intronic chr7:71725095(-) A-I      intronic chr7:71411910(-) A-I      intronic chr7:71417994(-) A-I      intronic chr7:71477318(-) A-I      intronic chr7:71738582(-) A-I      intronic chr7:71712416(-) A-I      intronic chr7:71733666(-) A-I      intronic chr7:71434978(-) A-I      intronic chr7:71411565(-) A-I      intronic chr7:71820497(-) A-I      intronic chr7:71415026(-) A-I      intronic chr7:71354824(-) A-I      intronic chr7:71725101(-) A-I      intronic chr7:71738668(-) A-I      intronic chr7:71658264(-) A-I      intronic chr7:71333535(-) A-I      intronic chr7:71700073(-) A-I      intronic chr7:71689548(-) A-I      intronic chr7:71629096(-) A-I      intronic chr7:71356780(-) A-I      intronic chr7:71481566(-) A-I      intronic chr7:71691910(-) A-I      intronic chr7:71704178(-) A-I      intronic chr7:71738769(-) A-I      intronic chr7:71726686(-) A-I      intronic chr7:71865700(-) A-I      intronic chr7:71717334(-) A-I      intronic chr7:71413860(-) A-I      intronic chr7:71347015(-) A-I      intronic chr7:71347052(-) A-I      intronic chr7:71446441(-) A-I      intronic chr7:71556277(-) A-I      intronic chr7:71337825(-) A-I      intronic chr7:71346801(-) A-I      intronic chr7:71412762(-) A-I      intronic chr7:71337666(-) A-I      intronic chr7:71482066(-) A-I      intronic chr7:71662759(-) A-I      intronic chr7:71716525(-) A-I      intronic chr7:71345116(-) A-I      intronic chr7:71661241(-) A-I      intronic chr7:71358593(-) A-I      intronic chr7:71705398(-) A-I      intronic chr7:71590224(-) A-I      intronic chr7:71348367(-) A-I      intronic chr7:71443464(-) A-I      intronic chr7:71700090(-) A-I      intronic chr7:71509769(-) A-I      intronic chr7:71728620(-) A-I      intronic chr7:71858447(-) A-I      intronic chr7:71813053(-) A-I      intronic chr7:71845412(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	CALN1	chr7:71446413(-) A-I intron -    22028664 chr7:71446423(-) A-I intron -    22028664 chr7:71446441(-) A-I intron -    22028664 chr7:71446453(-) A-I intron -    22028664 chr7:71446455(-) A-I intron -    22028664 chr7:71446469(-) A-I intron -    22028664 chr7:71446477(-) A-I intron -    22028664 chr7:71446486(-) A-I intron -    22028664 chr7:71446500(-) A-I intron -    22028664 chr7:71446527(-) A-I intron -    22028664 chr7:71446556(-) A-I intron -    22028664 chr7:71446579(-) A-I intron -    22028664 chr7:71545952(-) A-G intron -    22484847 chr7:71545968(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	CALN1	chr7:71245990-71245991(-) m6A 3'UTR       24209618 chr7:71246136-71246137(-) m6A 3'UTR       24209618//22575960 chr7:71246164-71246165(-) m6A 3'UTR       24209618//22575960 chr7:71246169-71246170(-) m6A 3'UTR       24209618//22575960 chr7:71246250-71246251(-) m6A 3'UTR       24209618//25456834//24981863//22575960 chr7:71246299-71246300(-) m6A 3'UTR       24209618//25456834//24981863//22575960 chr7:71246326-71246327(-) m6A 3'UTR       24209618//25456834//24981863//22575960 chr7:71246335-71246336(-) m6A 3'UTR       25456834//24981863//22575960 chr7:71246761-71246762(-) m6A 3'UTR       25456834 chr7:71246859-71246860(-) m6A 3'UTR       25456834 chr7:71247263-71247264(-) m6A 3'UTR       24209618 chr7:71249334-71249335(-) m6A 3'UTR       24209618 chr7:71249349-71249350(-) m6A 3'UTR       24209618 chr7:71249478-71249479(-) m6A 3'UTR       24209618//25456834 chr7:71249496-71249497(-) m6A 3'UTR       24209618//25456834 chr7:71249562-71249563(-) m6A 3'UTR       25456834 chr7:71249671-71249672(-) m6A 3'UTR       24209618 chr7:71249719-71249720(-) m6A 3'UTR       24209618 chr7:71249727-71249728(-) m6A 3'UTR       24209618 chr7:71249972-71249973(-) m6A 3'UTR       25456834 chr7:71250027-71250028(-) m6A 3'UTR       25456834 chr7:71250070-71250071(-) m6A 3'UTR       25456834//24981863 chr7:71250078-71250079(-) m6A 3'UTR       25456834//24981863 chr7:71251468-71251469(-) m6A 3'UTR       24209618 chr7:71251516-71251517(-) m6A 3'UTR       24209618 chr7:71251761-71251762(-) m6A 3'UTR       24209618//25456834 chr7:71251811-71251812(-) m6A 3'UTR       24209618//25456834 chr7:71251817-71251818(-) m6A 3'UTR       24209618//25456834 chr7:71251955-71251956(-) m6A 3'UTR       24209618//25456834 chr7:71252044-71252045(-) m6A 3'UTR       24209618//25456834 chr7:71252234-71252235(-) m6A 3'UTR       25456834 chr7:71252340-71252341(-) m6A 3'UTR       24209618//25456834 chr7:71252391-71252392(-) m6A 3'UTR       25456834//24981863 chr7:71252461-71252462(-) m6A 3'UTR       24209618//25456834//24981863 chr7:71252569-71252570(-) m6A 3'UTR       24209618//25456834//24981863//22575960 chr7:71252623-71252624(-) m6A 3'UTR       24209618//25456834//24981863//22575960 chr7:71252638-71252639(-) m6A 3'UTR       24209618//25456834//24981863//22575960 chr7:71252663-71252664(-) m6A 3'UTR       24209618//25456834//24981863//22575960 chr7:71252671-71252672(-) m6A 3'UTR       24209618//25456834//24981863//22575960 chr7:71252677-71252678(-) m6A 3'UTR       24209618//25456834//24981863//22575960 chr7:71252697-71252698(-) m6A 3'UTR       24209618//25456834//24981863//22575960

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	CALN1	Chromatin K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: mcpv-miR-P1-3p
Interactor2: CALN1

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//Targetscan
Support Database	RepTar//VmiReg