Basic Information:

  VIRBase ID:  

VHID00682268

  Virus:  

Merkel cell polyomavirus

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcpv-miR-P1-3p:  MIMAT0010151          URM1:  NR_049743     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcpv-miR-P1-3p	URM1
miRBase Accession/Entrez ID	MIMAT0010151	81605
Organism	Merkel cell polyomavirus	Homo sapiens
Category	miRNA	mRNA
Alias	-	C9orf74

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	URM1	chr9:131137780(+) A-I      intronic chr9:131139324(+) A-I      intronic chr9:131139702(+) A-I      intronic chr9:131139711(+) A-I      intronic chr9:131140584(+) A-I      intronic chr9:131140701(+) A-I      intronic chr9:131143342(+) A-I      intronic chr9:131143365(+) A-I      intronic chr9:131143704(+) A-I      intronic chr9:131143729(+) A-I      intronic chr9:131140705(+) A-I      intronic chr9:131141932(+) A-I      intronic chr9:131141667(+) A-I      intronic chr9:131141485(+) A-I      intronic chr9:131141549(+) A-I      intronic chr9:131141608(+) A-I      intronic chr9:131141621(+) A-I      intronic chr9:131135097(+) A-I      intronic chr9:131141708(+) A-I      intronic chr9:131137726(+) A-I      intronic chr9:131137735(+) A-I      intronic chr9:131137761(+) A-I      intronic chr9:131141670(+) A-I      intronic chr9:131137892(+) A-I      intronic chr9:131137925(+) A-I      intronic chr9:131141959(+) A-I      intronic chr9:131143027(+) A-I      intronic chr9:131139046(+) A-I      intronic chr9:131143040(+) A-I      intronic chr9:131143155(+) A-I      intronic chr9:131143310(+) A-I      intronic chr9:131139057(+) A-I      intronic chr9:131141573(+) A-I      intronic chr9:131142061(+) A-I      intronic chr9:131143800(+) A-I      intronic chr9:131142000(+) A-I      intronic chr9:131141054(+) A-I      intronic chr9:131143818(+) A-I      intronic chr9:131143820(+) A-I      intronic chr9:131142936(+) A-I      intronic chr9:131143019(+) A-I      intronic chr9:131142245(+) A-I      intronic chr9:131141583(+) A-I      intronic chr9:131140709(+) A-I      intronic chr9:131139118(+) A-I      intronic chr9:131143855(+) A-I      intronic chr9:131138574(+) A-I      intronic chr9:131138029(+) A-I      intronic chr9:131142965(+) A-I      intronic chr9:131142379(+) A-I      intronic chr9:131138103(+) A-I      intronic chr9:131143041(+) A-I      intronic chr9:131143014(+) A-I      intronic chr9:131142995(+) A-I      intronic chr9:131140655(+) A-I      intronic chr9:131137732(+) A-I      intronic chr9:131143123(+) A-I      intronic chr9:131142978(+) A-I      intronic chr9:131141145(+) A-I      intronic chr9:131142331(+) A-I      intronic chr9:131137956(+) A-I      intronic chr9:131143799(+) A-I      intronic chr9:131138566(+) A-I      intronic chr9:131141998(+) A-I      intronic chr9:131137913(+) A-I      intronic chr9:131140013(+) A-I      intronic chr9:131142984(+) A-I      intronic chr9:131142172(+) A-I      intronic chr9:131141664(+) A-I      intronic chr9:131141627(+) A-I      intronic chr9:131141968(+) A-I      intronic chr9:131141606(+) A-I      intronic chr9:131143015(+) A-I      intronic chr9:131137894(+) A-I      intronic chr9:131138111(+) A-I      intronic chr9:131138061(+) A-I      intronic chr9:131143836(+) A-I      intronic chr9:131141661(+) A-I      intronic chr9:131142289(+) A-I      intronic chr9:131140696(+) A-I      intronic chr9:131143828(+) A-I      intronic chr9:131143089(+) A-I      intronic chr9:131138550(+) A-I      intronic chr9:131143364(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	URM1	chr9:131140655(+) A-G intron -    22484847 chr9:131140656(+) A-G intron -    22484847 chr9:131140696(+) A-G intron -    22484847 chr9:131140709(+) A-G intron -    22484847 chr9:131141664(+) A-G intron -    22484847 chr9:131141998(+) A-G intron -    22484847 chr9:131142172(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	URM1	chr9:131133678-131133679(+) Y CDS       25219674 chr9:131140350-131140351(+) m6A CDS//exon       - chr9:131140371-131140372(+) m6A CDS//exon       - chr9:131140380-131140381(+) m6A CDS//exon       - chr9:131150097-131150098(+) m6A CDS//exon       - chr9:131150106-131150107(+) m6A CDS//exon       - chr9:131150169-131150170(+) m6A 3'UTR//CDS//exon       - chr9:131152211-131152212(+) m6A 3'UTR       - chr9:131152346-131152347(+) m6A 3'UTR       25456834 chr9:131152413-131152414(+) m6A 3'UTR       24284625//25456834//24981863 chr9:131152451-131152452(+) m6A 3'UTR       24284625//25456834//24981863 chr9:131152529-131152530(+) m6A 3'UTR       24284625//24981863 chr9:131152676-131152677(+) m6A 3'UTR       24284625//24981863 chr9:131152748-131152749(+) m6A 3'UTR       26404942 chr9:131152809-131152810(+) Y 3'UTR       26075521 chr9:131152821-131152822(+) m6A 3'UTR       26404942

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	URM1	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HeLa-S3 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells     - Ribosome HEK-293 cells     22199352 Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: mcpv-miR-P1-3p
Interactor2: URM1

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//Targetscan
Support Database	RepTar//VmiReg