Basic Information:

  VIRBase ID:  

VHID00682129

  Virus:  

Merkel cell polyomavirus

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcpv-miR-P1-3p:  MIMAT0010151          ARMC5:  NM_001105247     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcpv-miR-P1-3p	ARMC5
miRBase Accession/Entrez ID	MIMAT0010151	79798
Organism	Merkel cell polyomavirus	Homo sapiens
Category	miRNA	mRNA
Alias	-	AIMAH2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ARMC5	chr16:31475446(+) A-I      intronic chr16:31475496(+) A-I      intronic chr16:31475500(+) A-I      intronic chr16:31475507(+) A-I      intronic chr16:31475378(+) A-I      intronic chr16:31475383(+) A-I      intronic chr16:31472046(+) A-I      intronic chr16:31475490(+) A-I      intronic chr16:31475402(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	ARMC5	chr16:31476887(+) G-T intron -    21725310

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ARMC5	chr16:31469466-31469467(+) m6A 5'UTR       24284625//22575960//22608085 chr16:31469513-31469514(+) m6A 5'UTR       24284625//24981863//22575960//22608085 chr16:31469526-31469527(+) m6A 5'UTR       24284625//24981863//22575960//22608085 chr16:31469596-31469597(+) m6A 5'UTR       24284625//24981863//22575960//22608085 chr16:31469816-31469817(+) m6A CDS       24284625//27371828//27773536//22608085 chr16:31470158-31470159(+) m6A 5'UTR//intron       24284625//27371828//27773536//22575960//22608085 chr16:31470214-31470215(+) m6A 5'UTR//CDS       24284625//25456834//24981863//27371828//27773536//22608085 chr16:31470223-31470224(+) m6A 5'UTR//CDS       24284625//25456834//24981863//27371828//27773536//22608085 chr16:31470359-31470360(+) m6A 5'UTR//intron       24284625//25456834//24981863//27371828//27773536//22608085 chr16:31470516-31470517(+) m6A 5'UTR//intron       24284625//24981863//27371828//27773536//22608085 chr16:31470608-31470609(+) m6A 5'UTR//intron       24284625//24981863//27371828//27773536//22608085 chr16:31470686-31470687(+) m6A 5'UTR//intron       24284625//24981863 chr16:31470706-31470707(+) m6A 5'UTR//intron       24284625//24981863 chr16:31470744-31470745(+) m6A 5'UTR//intron       24284625//25456834//24981863//27773536 chr16:31470873-31470874(+) m6A CDS//intron       24284625//25456834//24981863//27773536//22575960//22608085 chr16:31470939-31470940(+) m6A CDS//intron       24284625//25456834//24981863//22575960//22608085 chr16:31470956-31470957(+) m6A CDS//intron       24284625//25456834//24981863//22608085 chr16:31471233-31471234(+) m6A 5'UTR//CDS       24284625 chr16:31473318-31473319(+) m6A 3'UTR//CDS       - chr16:31473335-31473336(+) m6A 3'UTR//CDS       - chr16:31473493-31473494(+) m6A 3'UTR//CDS       24284625 chr16:31473541-31473542(+) m6A 3'UTR//CDS//intron       24284625 chr16:31473659-31473660(+) m6A CDS//intron       24284625//25456834//24981863 chr16:31473768-31473769(+) m6A CDS//intron       - chr16:31474006-31474007(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr16:31474100-31474101(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr16:31474180-31474181(+) m6A CDS       24284625//25456834//24981863 chr16:31474197-31474198(+) m6A CDS       24284625//25456834 chr16:31477263-31477264(+) m6A 3'UTR//CDS//exon       24284625 chr16:31477509-31477510(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr16:31477530-31477531(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr16:31477581-31477582(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr16:31477587-31477588(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr16:31477612-31477613(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr16:31477665-31477666(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr16:31477764-31477765(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//22608085 chr16:31477984-31477985(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr16:31478063-31478064(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr16:31478210-31478211(+) m6A 3'UTR       24284625//25456834//24981863//22575960//22608085 chr16:31478235-31478236(+) m6A 3'UTR       24284625//25456834//24981863//22575960//22608085 chr16:31478273-31478274(+) m6A 3'UTR       24284625//25456834//24981863//22575960//22608085 chr16:31478326-31478327(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr16:31478333-31478334(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr16:31478338-31478339(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr16:31478360-31478361(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr16:31478415-31478416(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr16:31478450-31478451(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr16:31478470-31478471(+) m6A 3'UTR       25456834//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ARMC5	Cytosol HCC cell line (HepG2)     - Exosome Blood     - Nucleolus K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: mcpv-miR-P1-3p
Interactor2: ARMC5

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//Targetscan
Support Database	RepTar//VmiReg