Basic Information:

  VIRBase ID:  

VHID00681271

  Virus:  

Merkel cell polyomavirus

  Host:  

Homo sapiens

  Confidence Score:  

0.2494

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcpv-miR-P1-3p:  MIMAT0010151          RASL12:  NM_001307930     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcpv-miR-P1-3p	RASL12
miRBase Accession/Entrez ID	MIMAT0010151	51285
Organism	Merkel cell polyomavirus	Homo sapiens
Category	miRNA	mRNA
Alias	-	RIS

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	RASL12	chr15:65348890(-) A-I      intronic chr15:65350599(-) A-I      intronic chr15:65350601(-) A-I      intronic chr15:65358732(-) A-I      intronic chr15:65348872(-) A-I      intronic chr15:65348875(-) A-I      intronic chr15:65350550(-) A-I      intronic chr15:65348876(-) A-I      intronic chr15:65350563(-) A-I      intronic chr15:65348885(-) A-I      intronic chr15:65348886(-) A-I      intronic chr15:65348169(-) A-I      intronic chr15:65348855(-) A-I      intronic chr15:65348898(-) A-I      intronic chr15:65348899(-) A-I      intronic chr15:65350544(-) A-I      intronic chr15:65358742(-) A-I      intronic chr15:65357003(-) A-I      intronic chr15:65356992(-) A-I      intronic chr15:65356987(-) A-I      intronic chr15:65350568(-) A-I      intronic chr15:65350560(-) A-I      intronic chr15:65350415(-) A-I      intronic chr15:65350353(-) A-I      intronic chr15:65358814(-) A-I      intronic chr15:65358738(-) A-I      intronic chr15:65358771(-) A-I      intronic chr15:65358754(-) A-I      intronic chr15:65358848(-) A-I      intronic chr15:65354214(-) A-I      intronic chr15:65348222(-) A-I      intronic chr15:65350459(-) A-I      intronic chr15:65358784(-) A-I      intronic chr15:65358691(-) A-I      intronic chr15:65358793(-) A-I      intronic chr15:65350441(-) A-I      intronic chr15:65348166(-) A-I      intronic chr15:65348382(-) A-I      intronic chr15:65358817(-) A-I      intronic chr15:65350364(-) A-I      intronic chr15:65354381(-) A-I      intronic chr15:65357002(-) A-I      intronic chr15:65348862(-) A-I      intronic chr15:65349431(-) A-I      intronic chr15:65348167(-) A-I      intronic chr15:65348868(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	RASL12	chr15:65345742-65345743(-) m6A 3'UTR       25456834//27773535 chr15:65345854-65345855(-) m6A 3'UTR       25456834//27773535 chr15:65345864-65345865(-) m6A 3'UTR       25456834//27773535 chr15:65345909-65345910(-) m6A 3'UTR       25456834//27773535 chr15:65345934-65345935(-) m6A 3'UTR       25456834//27773535 chr15:65345952-65345953(-) m6A 3'UTR       25456834//27773535 chr15:65346048-65346049(-) m6A 3'UTR       25456834//27773535 chr15:65346059-65346060(-) m6A 3'UTR       25456834//27773535 chr15:65346499-65346500(-) m6A 3'UTR       27773535 chr15:65346513-65346514(-) m6A 3'UTR       25456834//27773535 chr15:65346546-65346547(-) m6A 3'UTR       25456834//24981863//27773535 chr15:65346594-65346595(-) m6A 3'UTR       25456834//24981863//27773535 chr15:65346656-65346657(-) m6A 3'UTR       25456834//24981863//27773535 chr15:65346702-65346703(-) m6A 3'UTR       25456834//24981863//27773535 chr15:65346834-65346835(-) m6A 3'UTR       25456834//27773535 chr15:65346975-65346976(-) m6A 3'UTR       25456834 chr15:65346998-65346999(-) m6A 3'UTR       25456834 chr15:65347135-65347136(-) m6A 3'UTR       25456834//24981863//27773535 chr15:65347142-65347143(-) m6A 3'UTR       25456834//24981863//27773535 chr15:65347177-65347178(-) m6A 3'UTR       25456834//24981863//27773535 chr15:65347183-65347184(-) m6A 3'UTR       25456834//24981863//27773535 chr15:65347194-65347195(-) m6A 3'UTR       25456834//24981863//27773535 chr15:65347199-65347200(-) m6A 3'UTR       25456834//24981863 chr15:65347534-65347535(-) m6A CDS       25456834 chr15:65351686-65351687(-) m6A CDS       27773535 chr15:65351695-65351696(-) m6A CDS       27773535 chr15:65351725-65351726(-) m6A CDS       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	RASL12	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: mcpv-miR-P1-3p
Interactor2: RASL12

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg