Basic Information:

  VIRBase ID:  

VHID00681001

  Virus:  

Merkel cell polyomavirus

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcpv-miR-P1-3p:  MIMAT0010151          HYPK:  NM_016400     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcpv-miR-P1-3p	HYPK
miRBase Accession/Entrez ID	MIMAT0010151	25764
Organism	Merkel cell polyomavirus	Homo sapiens
Category	miRNA	mRNA
Alias	-	C15orf63//HSPC136

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	HYPK	chr15:44094710(+) A-I      3'UTR chr15:44094639(+) A-I      3'UTR

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	HYPK	chr15:44089286-44089287(+) m6A 5'UTR       - chr15:44089313-44089314(+) m6A 5'UTR       - chr15:44089330-44089331(+) m6A 5'UTR       - chr15:44090668-44090669(+) m6A 5'UTR       27773535 chr15:44090679-44090680(+) m6A 5'UTR       27773535 chr15:44090725-44090726(+) m6A 5'UTR       27773535 chr15:44090750-44090751(+) m6A 5'UTR       27773535 chr15:44090787-44090788(+) m6A 5'UTR//CDS       27773535 chr15:44090808-44090809(+) m6A 5'UTR//CDS       27773535 chr15:44090817-44090818(+) m6A 5'UTR//CDS       27773535 chr15:44090831-44090832(+) m6A 5'UTR//CDS       27773535 chr15:44092094-44092095(+) m6A 3'UTR//5'UTR       - chr15:44092107-44092108(+) m6A 3'UTR//5'UTR       - chr15:44092265-44092266(+) m6A 3'UTR//5'UTR       25456834 chr15:44092326-44092327(+) m6A 3'UTR//5'UTR       25456834 chr15:44092548-44092549(+) m6A exon//intron       27773535 chr15:44092637-44092638(+) m6A 5'UTR//exon//intron       27773535 chr15:44092648-44092649(+) m6A 5'UTR//exon//intron       27773535 chr15:44092673-44092674(+) m6A 5'UTR//exon//intron       27773535 chr15:44092700-44092701(+) m6A 3'UTR//5'UTR//exon       - chr15:44092856-44092857(+) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//22575960 chr15:44092862-44092863(+) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//27773535//22575960 chr15:44092870-44092871(+) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//27773535//22575960 chr15:44092900-44092901(+) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//27773535//22575960 chr15:44092920-44092921(+) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//27773535//22575960 chr15:44093348-44093349(+) m6A 3'UTR//CDS//exon//intron       24284625//24209618//24981863//27773535//22575960 chr15:44093376-44093377(+) m6A 3'UTR//CDS//exon//intron       24284625//24209618//24981863//27773535//22575960 chr15:44093438-44093439(+) m6A exon//intron       24284625//24209618//24981863//27773535//22575960 chr15:44093450-44093451(+) m6A exon//intron       24981863//27773535 chr15:44093689-44093690(+) m6A exon//intron       24209618//24981863//27773535 chr15:44093724-44093725(+) m6A 3'UTR//CDS//exon       24284625//24209618//24981863//27773535//22575960 chr15:44093837-44093838(+) m6A 3'UTR//intron       24209618//27773535 chr15:44093880-44093881(+) m6A 3'UTR//intron       22575960 chr15:44093958-44093959(+) m6A 3'UTR//CDS//exon       24209618//27773535//22575960

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	HYPK	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Membrane K562 cells     - Nucleolus K562 cells     - Nucleoplasm K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: mcpv-miR-P1-3p
Interactor2: HYPK

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg