Basic Information:

  VIRBase ID:  

VHID00680169

  Virus:  

Merkel cell polyomavirus

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcpv-miR-P1-3p:  MIMAT0010151          SEMA7A:  NM_001146029     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcpv-miR-P1-3p	SEMA7A
miRBase Accession/Entrez ID	MIMAT0010151	8482
Organism	Merkel cell polyomavirus	Homo sapiens
Category	miRNA	mRNA
Alias	-	CD108//CDw108//H-SEMA-K1//H-Sema-L//JMH//SEMAK1//SEMAL

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	SEMA7A	chr15:74713512(-) A-I      intronic chr15:74719849(-) A-I      intronic chr15:74719918(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SEMA7A	chr15:74701854-74701855(-) m6A 3'UTR       26404942 chr15:74701875-74701876(-) m6A 3'UTR       26404942 chr15:74702301-74702302(-) m6A 3'UTR       26404942 chr15:74702429-74702430(-) m6A 3'UTR       24209618//25456834 chr15:74702495-74702496(-) m6A 3'UTR       24209618//25456834//28052920//27371828 chr15:74702562-74702563(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27371828//22575960//22608085 chr15:74702603-74702604(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr15:74702678-74702679(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr15:74702687-74702688(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr15:74702715-74702716(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr15:74702852-74702853(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27371828//22608085 chr15:74703289-74703290(-) m6A CDS       - chr15:74703325-74703326(-) m6A CDS//exon       - chr15:74703387-74703388(-) m6A exon//intron       - chr15:74703639-74703640(-) m6A CDS//exon       - chr15:74703932-74703933(-) m6A CDS//exon       - chr15:74703950-74703951(-) m6A CDS//exon       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SEMA7A	Chromatin K562 cells     - Cytosol HCC cell line (HepG2)     - Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Insoluble cytoplasm HCC cell line (HepG2)     - Nucleolus K562 cells     - Nucleus K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: mcpv-miR-P1-3p
Interactor2: SEMA7A

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid
Support Database	VmiReg