Basic Information:

  VIRBase ID:  

VHID00679911

  Virus:  

Merkel cell polyomavirus

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcpv-miR-P1-3p:  MIMAT0010151          SNAI2:  NM_003068     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcpv-miR-P1-3p	SNAI2
miRBase Accession/Entrez ID	MIMAT0010151	6591
Organism	Merkel cell polyomavirus	Homo sapiens
Category	miRNA	mRNA
Alias	-	SLUG//SLUGH//SLUGH1//SNAIL2//WS2D

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SNAI2	chr8:49830997-49830998(-) m6A 3'UTR       22608085 chr8:49831103-49831104(-) m6A 3'UTR       24981863//22608085 chr8:49831250-49831251(-) m6A 3'UTR       24209618//24981863//22608085 chr8:49831340-49831341(-) m6A 3'UTR       24284625//24209618//24981863//22608085 chr8:49831398-49831399(-) m6A CDS       24284625//24981863//22608085 chr8:49831427-49831428(-) m6A CDS       24209618//24981863//22608085 chr8:49831438-49831439(-) m6A CDS       24209618//24981863//22608085 chr8:49831472-49831473(-) m6A CDS       24209618//24981863//22608085 chr8:49831501-49831502(-) m6A CDS       24981863//22608085 chr8:49832463-49832464(-) m6A CDS       24284625//24981863//22575960//22608085 chr8:49832473-49832474(-) m6A CDS       24284625//24981863//22575960//22608085 chr8:49832491-49832492(-) m6A CDS       24284625//24981863//22575960//22608085 chr8:49832541-49832542(-) m6A CDS       24284625//24981863//22575960//22608085 chr8:49832644-49832645(-) m6A CDS       24284625//24209618//24981863//22575960//22608085 chr8:49832673-49832674(-) m6A CDS       24284625//24209618//24981863//22575960//22608085 chr8:49832723-49832724(-) m6A CDS       24284625//24209618//24981863//22608085 chr8:49832743-49832744(-) m6A CDS       24284625//24209618//24981863//22608085 chr8:49832786-49832787(-) m6A CDS       24284625//24209618//24981863//22608085 chr8:49832901-49832902(-) m6A CDS       24284625//24209618//22608085 chr8:49833756-49833757(-) m6A CDS       24209618 chr8:49833761-49833762(-) m6A CDS       24209618 chr8:49833771-49833772(-) m6A CDS       24209618 chr8:49833836-49833837(-) m6A 5'UTR       - chr8:49833864-49833865(-) m6A 5'UTR       - chr8:49833885-49833886(-) m6A 5'UTR       - chr8:49834010-49834011(-) m6A 5'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SNAI2	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: mcpv-miR-P1-3p
Interactor2: SNAI2

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid
Support Database	VmiReg