Detail Information

Basic Information:


  VIRBase ID:  

VHID00679551

  Virus:  

Merkel cell polyomavirus

  Host:  

Homo sapiens

  Confidence Score:  

0.2494

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcpv-miR-P1-3p:           MAP3K11:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol mcpv-miR-P1-3p MAP3K11
miRBase
Accession/Entrez ID		 MIMAT0010151 4296
Organism Merkel cell polyomavirus Homo sapiens
Category miRNA mRNA
Alias - MEKK11//MLK-3//MLK3//PTK1//SPRK

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR MAP3K11
chr11:65369765(-) A-I      intronic
chr11:65369815(-) A-I      intronic
chr11:65369820(-) A-I      intronic
chr11:65369817(-) A-I      intronic
chr11:65369811(-) A-I      intronic
chr11:65369786(-) A-I      intronic
chr11:65376266(-) A-I      intronic
chr11:65376117(-) A-I      intronic
chr11:65376269(-) A-I      intronic
chr11:65376265(-) A-I      intronic
chr11:65376225(-) A-I      intronic
chr11:65376116(-) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase MAP3K11
chr11:65365246-65365247(-) m6A 3'UTR       24284625//25456834//24981863//27773535//22608085
chr11:65365358-65365359(-) m6A 3'UTR       24284625//25456834//24981863//27773535//22575960//22608085
chr11:65365502-65365503(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr11:65365568-65365569(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr11:65365589-65365590(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//22575960//22608085
chr11:65365628-65365629(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr11:65365654-65365655(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr11:65365699-65365700(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr11:65365804-65365805(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085
chr11:65365811-65365812(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085
chr11:65365825-65365826(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085
chr11:65365864-65365865(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085
chr11:65365876-65365877(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085
chr11:65365882-65365883(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085
chr11:65365895-65365896(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085
chr11:65366072-65366073(-) m6A CDS//intron       24284625//24209618//28052920//27371828//27773536//22575960
chr11:65366926-65366927(-) m6A 3'UTR//CDS//exon       24284625//24209618//27371828//27773536
chr11:65373482-65373483(-) Gm 3'UTR//5'UTR//CDS//exon       -
chr11:65373494-65373495(-) m6A 3'UTR//5'UTR//CDS//exon       27773536
chr11:65374153-65374154(-) m6A exon//intron       27773536
chr11:65374274-65374275(-) m6A 5'UTR//CDS//exon       27371828//27773536
chr11:65374302-65374303(-) m6A 5'UTR//intron       27371828//27773536
chr11:65374308-65374309(-) m6A 5'UTR//intron       27371828//27773536
chr11:65374800-65374801(-) m6A CDS//exon       27371828//27773536
chr11:65374835-65374836(-) m6A CDS//exon       27371828//27773536
chr11:65374981-65374982(-) m6A CDS//exon       25456834//27371828//27773536
chr11:65375187-65375188(-) m6A CDS//exon//intron       24284625//25456834//27371828//27773536
chr11:65375271-65375272(-) m6A CDS//exon//intron       24284625//25456834//27371828//27773536
chr11:65375286-65375287(-) m6A CDS//exon//intron       25456834
chr11:65375327-65375328(-) m6A exon//intron       25456834
chr11:65375343-65375344(-) m6A exon//intron       25456834
chr11:65375519-65375520(-) m6A CDS//exon       25456834//27773535
chr11:65375560-65375561(-) m6A exon//intron       25456834//27773535
chr11:65375566-65375567(-) m6A exon//intron       25456834//27773535
chr11:65375635-65375636(-) m6A exon//intron       25456834
chr11:65375829-65375830(-) m6A CDS//exon       24981863//26404942
chr11:65375874-65375875(-) m6A CDS//exon       24981863//26404942
chr11:65376017-65376018(-) m6A exon//intron       27773535
chr11:65377409-65377410(-) m6A exon//intron       25456834
chr11:65377462-65377463(-) m6A exon//intron       25456834
chr11:65377470-65377471(-) m6A exon//intron       25456834
chr11:65378637-65378638(-) m6A 5'UTR//exon//intron       27773536
chr11:65378672-65378673(-) m6A 5'UTR//exon//intron       27371828//27773536
chr11:65378693-65378694(-) m6A 5'UTR//exon//intron       27371828//27773536
chr11:65378746-65378747(-) m6A 5'UTR//exon//intron       27773536
chr11:65380769-65380770(-) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//27371828//27773536
chr11:65380781-65380782(-) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//27371828//27773536
chr11:65381088-65381089(-) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085
chr11:65381279-65381280(-) m6A 5'UTR//exon//intron       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085
chr11:65381310-65381311(-) m6A 5'UTR//exon//intron       24284625//24209618//25456834//24981863//27371828//27773536//22608085
chr11:65381383-65381384(-) m6A 5'UTR//exon//intron       24284625//24209618//25456834//24981863//27371828//27773536//22608085
chr11:65381515-65381516(-) m6A 5'UTR//exon       24284625//24209618//25456834//24981863//28052920//27371828//27773536//22575960//22608085
chr11:65381526-65381527(-) m6A 5'UTR//exon       24284625//24209618//25456834//24981863//28052920//27371828//27773536//22575960//22608085
chr11:65381601-65381602(-) m6A 5'UTR//exon       24284625//24209618//25456834//24981863//28052920//26404942//27371828//27773536//22575960//22608085
chr11:65381654-65381655(-) m6A 5'UTR//exon       24284625//24209618//25456834//24981863//28052920//27371828//27773536//22575960//22608085
chr11:65381702-65381703(-) m1A 5'UTR//exon       26863196
chr11:65381761-65381762(-) m6A exon       24284625//25456834//24981863//27371828//27773536//22608085
chr11:65381858-65381859(-) m6A exon       24284625//22608085
chr11:65381988-65381989(-) m6A exon       24284625//25456834//24981863//22608085
chr11:65382085-65382086(-) m6A exon       24284625//24981863//22608085
chr11:65382090-65382091(-) m6A exon       24284625//24981863//22608085
chr11:65382175-65382176(-) m6A exon       24284625//24981863//22608085
chr11:65382213-65382214(-) m6A exon       24284625//24981863//22608085
chr11:65382244-65382245(-) m6A exon       24981863
chr11:65382340-65382341(-) m6A exon       24981863
chr11:65382363-65382364(-) m6A exon       24981863
chr11:65382647-65382648(-) m6A exon       24284625//24981863//22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate MAP3K11
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Cytosol HCC cell line (HepG2)|HeLa-S3 cells     -
Exosome Blood     -
Insoluble cytoplasm K562 cells     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: mcpv-miR-P1-3p
Interactor2: MAP3K11

Evidence Support:


Prediction-Evidence cRep//miRanda//PITA//Rep//RNAHybrid//Targetscan
Support Database RepTar//VmiReg

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