Basic Information:

  VIRBase ID:  

VHID00678889

  Virus:  

Merkel cell polyomavirus

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcpv-miR-P1-3p:  MIMAT0010151          ABAT:  NM_001386607     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcpv-miR-P1-3p	ABAT
miRBase Accession/Entrez ID	MIMAT0010151	18
Organism	Merkel cell polyomavirus	Homo sapiens
Category	miRNA	mRNA
Alias	-	GABA-AT//GABAT//NPD009

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ABAT	chr16:8852699(+) A-I      intronic chr16:8774908(+) A-I      intronic chr16:8849529(+) A-I      intronic chr16:8801137(+) A-I      intronic chr16:8848776(+) A-I      intronic chr16:8786035(+) A-I      intronic chr16:8786912(+) A-I      intronic chr16:8793474(+) A-I      intronic chr16:8800045(+) A-I      intronic chr16:8831138(+) A-I      intronic chr16:8831150(+) A-I      intronic chr16:8831183(+) A-I      intronic chr16:8848756(+) A-I      intronic chr16:8848759(+) A-I      intronic chr16:8849913(+) A-I      intronic chr16:8849914(+) A-I      intronic chr16:8849947(+) A-I      intronic chr16:8849951(+) A-I      intronic chr16:8849989(+) A-I      intronic chr16:8849950(+) A-I      intronic chr16:8846406(+) A-I      intronic chr16:8846434(+) A-I      intronic chr16:8847050(+) A-I      intronic chr16:8847214(+) A-I      intronic chr16:8847220(+) A-I      intronic chr16:8774900(+) A-I      intronic chr16:8831982(+) A-I      intronic chr16:8849949(+) A-I      intronic chr16:8806009(+) A-I      intronic chr16:8806008(+) A-I      intronic chr16:8805923(+) A-I      intronic chr16:8805914(+) A-I      intronic chr16:8805912(+) A-I      intronic chr16:8805870(+) A-I      intronic chr16:8804486(+) A-I      intronic chr16:8804442(+) A-I      intronic chr16:8804432(+) A-I      intronic chr16:8804429(+) A-I      intronic chr16:8804403(+) A-I      intronic chr16:8804387(+) A-I      intronic chr16:8804384(+) A-I      intronic chr16:8825000(+) A-I      intronic chr16:8824994(+) A-I      intronic chr16:8822608(+) A-I      intronic chr16:8821717(+) A-I      intronic chr16:8819056(+) A-I      intronic chr16:8819035(+) A-I      intronic chr16:8818838(+) A-I      intronic chr16:8817077(+) A-I      intronic chr16:8816276(+) A-I      intronic chr16:8816265(+) A-I      intronic chr16:8816264(+) A-I      intronic chr16:8794557(+) A-I      intronic chr16:8816236(+) A-I      intronic chr16:8811746(+) A-I      intronic chr16:8804333(+) A-I      intronic chr16:8803505(+) A-I      intronic chr16:8803467(+) A-I      intronic chr16:8802367(+) A-I      intronic chr16:8809465(+) A-I      intronic chr16:8802270(+) A-I      intronic chr16:8802269(+) A-I      intronic chr16:8801662(+) A-I      intronic chr16:8800246(+) A-I      intronic chr16:8800010(+) A-I      intronic chr16:8798778(+) A-I      intronic chr16:8809408(+) A-I      intronic chr16:8798777(+) A-I      intronic chr16:8796348(+) A-I      intronic chr16:8796345(+) A-I      intronic chr16:8796290(+) A-I      intronic chr16:8794921(+) A-I      intronic chr16:8794902(+) A-I      intronic chr16:8794875(+) A-I      intronic chr16:8794652(+) A-I      intronic chr16:8794648(+) A-I      intronic chr16:8809398(+) A-I      intronic chr16:8793925(+) A-I      intronic chr16:8793861(+) A-I      intronic chr16:8793797(+) A-I      intronic chr16:8786127(+) A-I      intronic chr16:8793796(+) A-I      intronic chr16:8793732(+) A-I      intronic chr16:8793308(+) A-I      intronic chr16:8792239(+) A-I      intronic chr16:8791595(+) A-I      intronic chr16:8791592(+) A-I      intronic chr16:8790303(+) A-I      intronic chr16:8790296(+) A-I      intronic chr16:8788016(+) A-I      intronic chr16:8787980(+) A-I      intronic chr16:8787967(+) A-I      intronic chr16:8787578(+) A-I      intronic chr16:8787548(+) A-I      intronic chr16:8787513(+) A-I      intronic chr16:8787509(+) A-I      intronic chr16:8787467(+) A-I      intronic chr16:8786974(+) A-I      intronic chr16:8786946(+) A-I      intronic chr16:8786909(+) A-I      intronic chr16:8786894(+) A-I      intronic chr16:8786812(+) A-I      intronic chr16:8786811(+) A-I      intronic chr16:8786780(+) A-I      intronic chr16:8786742(+) A-I      intronic chr16:8786059(+) A-I      intronic chr16:8786056(+) A-I      intronic chr16:8786055(+) A-I      intronic chr16:8786023(+) A-I      intronic chr16:8786022(+) A-I      intronic chr16:8785507(+) A-I      intronic chr16:8785498(+) A-I      intronic chr16:8785483(+) A-I      intronic chr16:8785481(+) A-I      intronic chr16:8785478(+) A-I      intronic chr16:8785426(+) A-I      intronic chr16:8785423(+) A-I      intronic chr16:8782680(+) A-I      intronic chr16:8781859(+) A-I      intronic chr16:8781304(+) A-I      intronic chr16:8781297(+) A-I      intronic chr16:8778429(+) A-I      intronic chr16:8778345(+) A-I      intronic chr16:8778340(+) A-I      intronic chr16:8778270(+) A-I      intronic chr16:8778254(+) A-I      intronic chr16:8775688(+) A-I      intronic chr16:8775616(+) A-I      intronic chr16:8872579(+) A-I      intronic chr16:8872575(+) A-I      intronic chr16:8861672(+) A-I      intronic chr16:8861632(+) A-I      intronic chr16:8860785(+) A-I      intronic chr16:8860679(+) A-I      intronic chr16:8860674(+) A-I      intronic chr16:8860670(+) A-I      intronic chr16:8860262(+) A-I      intronic chr16:8859319(+) A-I      intronic chr16:8853509(+) A-I      intronic chr16:8853499(+) A-I      intronic chr16:8851254(+) A-I      intronic chr16:8851166(+) A-I      intronic chr16:8851094(+) A-I      intronic chr16:8851058(+) A-I      intronic chr16:8849795(+) A-I      intronic chr16:8848653(+) A-I      intronic chr16:8848092(+) A-I      intronic chr16:8846361(+) A-I      intronic chr16:8845207(+) A-I      intronic chr16:8845180(+) A-I      intronic chr16:8845179(+) A-I      intronic chr16:8840228(+) A-I      intronic chr16:8840200(+) A-I      intronic chr16:8840195(+) A-I      intronic chr16:8839542(+) A-I      intronic chr16:8839460(+) A-I      intronic chr16:8839292(+) A-I      intronic chr16:8838640(+) A-I      intronic chr16:8838288(+) A-I      intronic chr16:8832716(+) A-I      intronic chr16:8832619(+) A-I      intronic chr16:8832081(+) A-I      intronic chr16:8831279(+) A-I      intronic chr16:8831266(+) A-I      intronic chr16:8851164(+) A-I      intronic chr16:8831180(+) A-I      intronic chr16:8831169(+) A-I      intronic chr16:8828870(+) A-I      intronic chr16:8828803(+) A-I      intronic chr16:8825009(+) A-I      intronic chr16:8825003(+) A-I      intronic chr16:8794934(+) A-I      intronic chr16:8831963(+) A-I      intronic chr16:8801688(+) A-I      intronic chr16:8872584(+) A-I      intronic chr16:8787526(+) A-I      intronic chr16:8865761(+) A-I      intronic chr16:8801701(+) A-I      intronic chr16:8792806(+) A-I      intronic chr16:8831729(+) A-I      intronic chr16:8838588(+) A-I      intronic chr16:8813700(+) A-I      intronic chr16:8793606(+) A-I      intronic chr16:8781825(+) A-I      intronic chr16:8845041(+) A-I      intronic chr16:8848786(+) A-I      intronic chr16:8854676(+) A-I      intronic chr16:8794894(+) A-I      intronic chr16:8865843(+) A-I      intronic chr16:8797095(+) A-I      intronic chr16:8782673(+) A-I      intronic chr16:8820354(+) A-I      intronic chr16:8863295(+) A-I      intronic chr16:8846462(+) A-I      intronic chr16:8790392(+) A-I      intronic chr16:8816263(+) A-I      intronic chr16:8829372(+) A-I      intronic chr16:8775076(+) A-I      intronic chr16:8856778(+) A-I      intronic chr16:8822575(+) A-I      intronic chr16:8870641(+) A-I      intronic chr16:8790202(+) A-I      intronic chr16:8782010(+) A-I      intronic chr16:8820364(+) A-I      intronic chr16:8831191(+) A-I      intronic chr16:8804366(+) A-I      intronic chr16:8779272(+) A-I      intronic chr16:8818334(+) A-I      intronic chr16:8859749(+) A-I      intronic chr16:8809213(+) A-I      intronic chr16:8813830(+) A-I      intronic chr16:8865355(+) A-I      intronic chr16:8865751(+) A-I      intronic chr16:8817010(+) A-I      intronic chr16:8857521(+) A-I      intronic chr16:8774932(+) A-I      intronic chr16:8804522(+) A-I      intronic chr16:8831522(+) A-I      intronic chr16:8786079(+) A-I      intronic chr16:8857496(+) A-I      intronic chr16:8848131(+) A-I      intronic chr16:8800009(+) A-I      intronic chr16:8847963(+) A-I      intronic chr16:8816832(+) A-I      intronic chr16:8794978(+) A-I      intronic chr16:8855951(+) A-I      intronic chr16:8785400(+) A-I      intronic chr16:8859733(+) A-I      intronic chr16:8831952(+) A-I      intronic chr16:8797263(+) A-I      intronic chr16:8831994(+) A-I      intronic chr16:8839049(+) A-I      intronic chr16:8793381(+) A-I      intronic chr16:8838264(+) A-I      intronic chr16:8804439(+) A-I      intronic chr16:8851105(+) A-I      intronic chr16:8800146(+) A-I      intronic chr16:8782751(+) A-I      intronic chr16:8793898(+) A-I      intronic chr16:8840211(+) A-I      intronic chr16:8781325(+) A-I      intronic chr16:8800451(+) A-I      intronic chr16:8848132(+) A-I      intronic chr16:8801283(+) A-I      intronic chr16:8821813(+) A-I      intronic chr16:8854722(+) A-I      intronic chr16:8848805(+) A-I      intronic chr16:8788409(+) A-I      intronic chr16:8859180(+) A-I      intronic chr16:8793558(+) A-I      intronic chr16:8778478(+) A-I      intronic chr16:8786973(+) A-I      intronic chr16:8840379(+) A-I      intronic chr16:8801108(+) A-I      intronic chr16:8865857(+) A-I      intronic chr16:8854706(+) A-I      intronic chr16:8819041(+) A-I      intronic chr16:8787491(+) A-I      intronic chr16:8817029(+) A-I      intronic chr16:8778309(+) A-I      intronic chr16:8816899(+) A-I      intronic chr16:8781268(+) A-I      intronic chr16:8832098(+) A-I      intronic chr16:8801144(+) A-I      intronic chr16:8781787(+) A-I      intronic chr16:8859719(+) A-I      intronic chr16:8865692(+) A-I      intronic chr16:8831996(+) A-I      intronic chr16:8779298(+) A-I      intronic chr16:8839086(+) A-I      intronic chr16:8803851(+) A-I      intronic chr16:8788095(+) A-I      intronic chr16:8803938(+) A-I      intronic chr16:8778482(+) A-I      intronic chr16:8874409(+) A-I      intronic chr16:8854677(+) A-I      intronic chr16:8804331(+) A-I      intronic chr16:8788322(+) A-I      intronic chr16:8778267(+) A-I      intronic chr16:8832024(+) A-I      intronic chr16:8832018(+) A-I      intronic chr16:8794912(+) A-I      intronic chr16:8790398(+) A-I      intronic chr16:8782790(+) A-I      intronic chr16:8802265(+) A-I      intronic chr16:8824856(+) A-I      intronic chr16:8851125(+) A-I      intronic chr16:8848011(+) A-I      intronic chr16:8832576(+) A-I      intronic chr16:8796282(+) A-I      intronic chr16:8840299(+) A-I      intronic chr16:8781894(+) A-I      intronic chr16:8794920(+) A-I      intronic chr16:8781854(+) A-I      intronic chr16:8816888(+) A-I      intronic chr16:8800024(+) A-I      intronic chr16:8860347(+) A-I      intronic chr16:8852783(+) A-I      intronic chr16:8838380(+) A-I      intronic chr16:8832764(+) A-I      intronic chr16:8781951(+) A-I      intronic chr16:8793906(+) A-I      intronic chr16:8817837(+) A-I      intronic chr16:8778268(+) A-I      intronic chr16:8831176(+) A-I      intronic chr16:8781848(+) A-I      intronic chr16:8838604(+) A-I      intronic chr16:8800016(+) A-I      intronic chr16:8786091(+) A-I      intronic chr16:8802173(+) A-I      intronic chr16:8775048(+) A-I      intronic chr16:8851234(+) A-I      intronic chr16:8797264(+) A-I      intronic chr16:8778932(+) A-I      intronic chr16:8803790(+) A-I      intronic chr16:8845213(+) A-I      intronic chr16:8847948(+) A-I      intronic chr16:8809409(+) A-I      intronic chr16:8860772(+) A-I      intronic chr16:8838981(+) A-I      intronic chr16:8790224(+) A-I      intronic chr16:8845206(+) A-I      intronic chr16:8828929(+) A-I      intronic chr16:8801636(+) A-I      intronic chr16:8788400(+) A-I      intronic chr16:8838868(+) A-I      intronic chr16:8839061(+) A-I      intronic chr16:8779273(+) A-I      intronic chr16:8848773(+) A-I      intronic chr16:8847953(+) A-I      intronic chr16:8874441(+) A-I      intronic chr16:8817907(+) A-I      intronic chr16:8832582(+) A-I      intronic chr16:8865412(+) A-I      intronic chr16:8852700(+) A-I      intronic chr16:8865594(+) A-I      intronic chr16:8778327(+) A-I      intronic chr16:8781263(+) A-I      intronic chr16:8832057(+) A-I      intronic chr16:8817878(+) A-I      intronic chr16:8863169(+) A-I      intronic chr16:8863350(+) A-I      intronic chr16:8788351(+) A-I      intronic chr16:8829377(+) A-I      intronic chr16:8779294(+) A-I      intronic chr16:8846366(+) A-I      intronic chr16:8831259(+) A-I      intronic chr16:8800467(+) A-I      intronic chr16:8800136(+) A-I      intronic chr16:8832770(+) A-I      intronic chr16:8855955(+) A-I      intronic chr16:8782510(+) A-I      intronic chr16:8781817(+) A-I      intronic chr16:8794895(+) A-I      intronic chr16:8859742(+) A-I      intronic chr16:8863168(+) A-I      intronic chr16:8804474(+) A-I      intronic chr16:8802245(+) A-I      intronic chr16:8840254(+) A-I      intronic chr16:8874585(+) A-I      intronic chr16:8840421(+) A-I      intronic chr16:8778189(+) A-I      intronic chr16:8797042(+) A-I      intronic chr16:8788418(+) A-I      intronic chr16:8782685(+) A-I      intronic chr16:8775122(+) A-I      intronic chr16:8788437(+) A-I      intronic chr16:8865767(+) A-I      intronic chr16:8855904(+) A-I      intronic chr16:8794924(+) A-I      intronic chr16:8805841(+) A-I      intronic chr16:8809403(+) A-I      intronic chr16:8778531(+) A-I      intronic chr16:8846421(+) A-I      intronic chr16:8818508(+) A-I      intronic chr16:8859701(+) A-I      intronic chr16:8788286(+) A-I      intronic chr16:8864414(+) A-I      intronic chr16:8818315(+) A-I      intronic chr16:8795015(+) A-I      intronic chr16:8787365(+) A-I      intronic chr16:8792753(+) A-I      intronic chr16:8803879(+) A-I      intronic chr16:8774938(+) A-I      intronic chr16:8840364(+) A-I      intronic chr16:8832031(+) A-I      intronic chr16:8849668(+) A-I      intronic chr16:8832140(+) A-I      intronic chr16:8792260(+) A-I      intronic chr16:8816889(+) A-I      intronic chr16:8813904(+) A-I      intronic chr16:8802127(+) A-I      intronic chr16:8778500(+) A-I      intronic chr16:8801097(+) A-I      intronic chr16:8801689(+) A-I      intronic chr16:8840367(+) A-I      intronic chr16:8791714(+) A-I      intronic chr16:8781884(+) A-I      intronic chr16:8839325(+) A-I      intronic chr16:8864268(+) A-I      intronic chr16:8854703(+) A-I      intronic chr16:8781343(+) A-I      intronic chr16:8792748(+) A-I      intronic chr16:8788148(+) A-I      intronic chr16:8850060(+) A-I      intronic chr16:8778175(+) A-I      intronic chr16:8794850(+) A-I      intronic chr16:8788154(+) A-I      intronic chr16:8793295(+) A-I      intronic chr16:8840460(+) A-I      intronic chr16:8872528(+) A-I      intronic chr16:8791677(+) A-I      intronic chr16:8792603(+) A-I      intronic chr16:8794992(+) A-I      intronic chr16:8794975(+) A-I      intronic chr16:8865739(+) A-I      intronic chr16:8864319(+) A-I      intronic chr16:8782524(+) A-I      intronic chr16:8848676(+) A-I      intronic chr16:8813875(+) A-I      intronic chr16:8857524(+) A-I      intronic chr16:8803732(+) A-I      intronic chr16:8802130(+) A-I      intronic chr16:8836624(+) A-I      intronic chr16:8781855(+) A-I      intronic chr16:8832025(+) A-I      intronic chr16:8848796(+) A-I      intronic chr16:8844986(+) A-I      intronic chr16:8803950(+) A-I      intronic chr16:8792752(+) A-I      intronic chr16:8795053(+) A-I      intronic chr16:8804323(+) A-I      intronic chr16:8848003(+) A-I      intronic chr16:8790370(+) A-I      intronic chr16:8830607(+) A-I      intronic chr16:8863324(+) A-I      intronic chr16:8839022(+) A-I      intronic chr16:8794594(+) A-I      intronic chr16:8831110(+) A-I      intronic chr16:8831187(+) A-I      intronic chr16:8791546(+) A-I      intronic chr16:8872588(+) A-I      intronic chr16:8794898(+) A-I      intronic chr16:8786073(+) A-I      intronic chr16:8795004(+) A-I      intronic chr16:8810994(+) A-I      intronic chr16:8778336(+) A-I      intronic chr16:8813772(+) A-I      intronic chr16:8850822(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	ABAT	chr16:8830220(+) A-I intron -    15342557 chr16:8830607(+) A-I intron -    15342557 chr16:8831110(+) A-I intron -    15342557 chr16:8831176(+) A-I intron -    15342557 chr16:8831187(+) A-I intron -    15342557 chr16:8831191(+) A-I intron -    15342557 chr16:8831259(+) A-I intron -    15342557 chr16:8802245(+) A-G intron -    22484847 chr16:8803950(+) A-G intron -    22484847 chr16:8804331(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ABAT	chr16:8768479-8768480(+) m6A 5'UTR//exon       25456834 chr16:8768497-8768498(+) m6A 5'UTR//exon       25456834 chr16:8768525-8768526(+) m6A 5'UTR//exon       25456834 chr16:8806701-8806702(+) m6A 5'UTR//intron       25456834 chr16:8808574-8808575(+) m6A exon//intron       25456834 chr16:8808600-8808601(+) m6A exon//intron       24209618//25456834 chr16:8808642-8808643(+) m6A exon//intron       24209618//25456834 chr16:8808654-8808655(+) m6A exon//intron       24209618//25456834 chr16:8808660-8808661(+) m6A exon//intron       24209618//25456834 chr16:8808693-8808694(+) m6A exon//intron       24209618//25456834 chr16:8808728-8808729(+) m6A exon//intron       24209618//25456834 chr16:8808839-8808840(+) m6A exon//intron       - chr16:8808884-8808885(+) m6A exon//intron       - chr16:8808929-8808930(+) m6A exon//intron       - chr16:8809002-8809003(+) m6A exon//intron       - chr16:8809013-8809014(+) m6A exon//intron       - chr16:8814766-8814767(+) m6A 5'UTR//intron       - chr16:8862106-8862107(+) m6A 3'UTR//CDS//exon       - chr16:8862798-8862799(+) m6A 3'UTR//CDS       - chr16:8866721-8866722(+) m6A 3'UTR//CDS       - chr16:8866760-8866761(+) m6A 3'UTR//CDS       - chr16:8868779-8868780(+) m6A 3'UTR//CDS       - chr16:8875736-8875737(+) m6A 3'UTR       25456834//24981863 chr16:8875803-8875804(+) m6A 3'UTR       25456834//24981863 chr16:8875808-8875809(+) m6A 3'UTR       25456834//24981863 chr16:8875837-8875838(+) m6A 3'UTR       25456834//24981863 chr16:8875930-8875931(+) m6A 3'UTR       25456834 chr16:8875949-8875950(+) m6A 3'UTR       25456834 chr16:8876022-8876023(+) m6A 3'UTR       24981863 chr16:8876053-8876054(+) m6A 3'UTR       25456834//24981863 chr16:8876059-8876060(+) m6A 3'UTR       25456834//24981863 chr16:8876075-8876076(+) m6A 3'UTR       25456834//24981863 chr16:8876099-8876100(+) m6A 3'UTR       25456834//24981863 chr16:8876294-8876295(+) m6A 3'UTR       25456834//24981863//22608085 chr16:8876336-8876337(+) m6A 3'UTR       25456834//24981863//22608085 chr16:8876553-8876554(+) m6A 3'UTR       24209618//25456834//24981863//22608085 chr16:8876564-8876565(+) m6A 3'UTR       24209618//25456834//24981863//22608085 chr16:8876596-8876597(+) m6A 3'UTR       24209618//25456834//24981863//22608085 chr16:8877135-8877136(+) m6A 3'UTR       22608085 chr16:8877174-8877175(+) m6A 3'UTR       25456834//24981863//22608085 chr16:8877181-8877182(+) m6A 3'UTR       25456834//24981863//22608085 chr16:8877189-8877190(+) m6A 3'UTR       25456834//24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ABAT	Cytosol HCC cell line (HepG2)     - Exosome Blood     - Insoluble cytoplasm HCC cell line (HepG2)     - Membrane HCC cell line (HepG2)     - Nucleus HCC cell line (HepG2)     -

Interaction Network (The top 100 interactions):

Interactor1: mcpv-miR-P1-3p
Interactor2: ABAT

Evidence Support:

Prediction-Evidence	cRep//PITA
Support Database	RepTar//VmiReg