Detail Information

Basic Information:


  VIRBase ID:  

VHID00678722

  Virus:  

Merkel cell polyomavirus

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcpv-miR-P1-5p:           ZNF805:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol mcpv-miR-P1-5p ZNF805
miRBase
Accession/Entrez ID		 MIMAT0010150 390980
Organism Merkel cell polyomavirus Homo sapiens
Category miRNA mRNA
Alias - -

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR ZNF805
chr19:57759393(+) A-I      intronic
chr19:57758430(+) A-I      intronic
chr19:57758024(+) A-I      intronic
chr19:57757642(+) A-I      intronic
chr19:57755670(+) A-I      intronic
chr19:57757675(+) A-I      intronic
chr19:57758010(+) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ZNF805
chr19:57752207-57752208(+) m6A 5'UTR       24981863
chr19:57764453-57764454(+) m6A 5'UTR//CDS       24209618//24981863//22608085
chr19:57764468-57764469(+) m6A 5'UTR//CDS       24209618//24981863//22608085
chr19:57764516-57764517(+) m6A 5'UTR//CDS       24284625//25456834//24981863//22608085
chr19:57764542-57764543(+) m6A 5'UTR//CDS       24284625//25456834//24981863//22608085
chr19:57764606-57764607(+) m6A CDS       24284625//25456834//24981863//22608085
chr19:57764657-57764658(+) m6A CDS       24284625//25456834//24981863//22608085
chr19:57764673-57764674(+) m6A CDS       24284625//25456834//24981863//22608085
chr19:57764901-57764902(+) m6A CDS       24981863//22608085
chr19:57765125-57765126(+) m6A CDS       22608085
chr19:57765245-57765246(+) m6A CDS       24284625//24981863//22608085
chr19:57765276-57765277(+) m6A CDS       24284625//24981863//22608085
chr19:57765545-57765546(+) m6A CDS       22608085
chr19:57765592-57765593(+) m6A CDS       22608085
chr19:57765741-57765742(+) m6A CDS       22608085
chr19:57765760-57765761(+) m6A CDS       24981863//22608085
chr19:57765908-57765909(+) m6A CDS       24209618//24981863//22608085
chr19:57765927-57765928(+) m6A CDS       24209618//24981863//22608085
chr19:57765947-57765948(+) m6A CDS       24209618//24981863//22608085
chr19:57765964-57765965(+) m6A CDS       24209618//24981863//22608085
chr19:57766047-57766048(+) m6A CDS       24284625//24981863//22608085
chr19:57766075-57766076(+) m6A 3'UTR       24284625//24981863//22608085
chr19:57766172-57766173(+) m6A 3'UTR       24981863//22608085
chr19:57766202-57766203(+) m6A 3'UTR       24981863//22608085
chr19:57766263-57766264(+) m6A 3'UTR       24981863//22608085
chr19:57766301-57766302(+) m6A 3'UTR       24981863//22608085
chr19:57766377-57766378(+) m6A 3'UTR       24981863//22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ZNF805
Chromatin K562 cells     -
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: mcpv-miR-P1-5p
Interactor2: ZNF805

Evidence Support:


Prediction-Evidence miRanda//Targetscan
Support Database VmiReg

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