Basic Information:

  VIRBase ID:  

VHID00678320

  Virus:  

Merkel cell polyomavirus

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcpv-miR-P1-5p:  MIMAT0010150          MMAA:  NM_172250     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcpv-miR-P1-5p	MMAA
miRBase Accession/Entrez ID	MIMAT0010150	166785
Organism	Merkel cell polyomavirus	Homo sapiens
Category	miRNA	mRNA
Alias	-	cblA

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	MMAA	chr4:146570998(+) A-I      intronic chr4:146569113(+) A-I      intronic chr4:146574121(+) A-I      intronic chr4:146569083(+) A-I      intronic chr4:146570982(+) A-I      intronic chr4:146570307(+) A-I      intronic chr4:146570058(+) A-I      intronic chr4:146570007(+) A-I      intronic chr4:146569999(+) A-I      intronic chr4:146569991(+) A-I      intronic chr4:146569987(+) A-I      intronic chr4:146551837(+) A-I      intronic chr4:146569980(+) A-I      intronic chr4:146569972(+) A-I      intronic chr4:146570017(+) A-I      intronic chr4:146569903(+) A-I      intronic chr4:146551626(+) A-I      intronic chr4:146569882(+) A-I      intronic chr4:146569881(+) A-I      intronic chr4:146569441(+) A-I      intronic chr4:146569429(+) A-I      intronic chr4:146569150(+) A-I      intronic chr4:146569148(+) A-I      intronic chr4:146574122(+) A-I      intronic chr4:146574091(+) A-I      intronic chr4:146569400(+) A-I      intronic chr4:146550382(+) A-I      intronic chr4:146573857(+) A-I      intronic chr4:146569218(+) A-I      intronic chr4:146569364(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	MMAA	chr4:146570163(+) A-I intron -    22327324 chr4:146574091(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	MMAA	chr4:146539830-146539831(+) m6A 5'UTR       22608085 chr4:146539841-146539842(+) m6A 5'UTR       22608085 chr4:146539932-146539933(+) m6A 5'UTR       27773535//22608085 chr4:146539957-146539958(+) m6A 5'UTR       27773535//22608085 chr4:146539976-146539977(+) m6A 5'UTR       27773535//22608085 chr4:146539983-146539984(+) m6A 5'UTR       27773535 chr4:146560434-146560435(+) m6A CDS//exon       24284625//24981863//27773535//22608085 chr4:146560495-146560496(+) m6A CDS//exon       24284625//24209618//24981863//27773535//22608085 chr4:146560508-146560509(+) m6A CDS//exon       24284625//24209618//24981863//27773535//22608085 chr4:146560521-146560522(+) m6A CDS//exon       24284625//24209618//24981863//22608085 chr4:146560554-146560555(+) m6A CDS//exon       24284625//24209618//24981863//22608085 chr4:146560686-146560687(+) m6A CDS//exon       22608085 chr4:146560692-146560693(+) m6A CDS//exon       22608085 chr4:146560710-146560711(+) m6A CDS//exon       - chr4:146576368-146576369(+) m6A 3'UTR//CDS//exon       - chr4:146576469-146576470(+) m6A 3'UTR//CDS//exon       24284625//22608085 chr4:146576489-146576490(+) m6A 3'UTR//CDS//exon       24284625//24981863//22608085 chr4:146576507-146576508(+) m6A 3'UTR//CDS//exon       24284625//24981863//22608085 chr4:146576540-146576541(+) m6A 3'UTR//CDS//exon       24981863//22608085 chr4:146576551-146576552(+) m6A 3'UTR//CDS//exon       24981863//22608085 chr4:146576581-146576582(+) m6A 3'UTR//CDS//exon       24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	MMAA	Exosome Blood     - Nucleoplasm K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: mcpv-miR-P1-5p
Interactor2: MMAA

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg