Basic Information:

  VIRBase ID:  

VHID00677529

  Virus:  

Merkel cell polyomavirus

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcpv-miR-P1-5p:  MIMAT0010150          ITPKC:  NM_025194     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcpv-miR-P1-5p	ITPKC
miRBase Accession/Entrez ID	MIMAT0010150	80271
Organism	Merkel cell polyomavirus	Homo sapiens
Category	miRNA	mRNA
Alias	-	IP3-3KC//IP3KC

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ITPKC	chr19:41227745(+) A-I      intronic chr19:41242101(+) A-I      intronic chr19:41227760(+) A-I      intronic chr19:41225524(+) A-I      intronic chr19:41227752(+) A-I      intronic chr19:41227536(+) A-I      intronic chr19:41230111(+) A-I      intronic chr19:41242081(+) A-I      intronic chr19:41238027(+) A-I      intronic chr19:41237888(+) A-I      intronic chr19:41237964(+) A-I      intronic chr19:41242088(+) A-I      intronic chr19:41242053(+) A-I      intronic chr19:41242046(+) A-I      intronic chr19:41241938(+) A-I      intronic chr19:41241076(+) A-I      intronic chr19:41240613(+) A-I      intronic chr19:41240562(+) A-I      intronic chr19:41240553(+) A-I      intronic chr19:41240536(+) A-I      intronic chr19:41238163(+) A-I      intronic chr19:41238057(+) A-I      intronic chr19:41236599(+) A-I      intronic chr19:41236596(+) A-I      intronic chr19:41236569(+) A-I      intronic chr19:41236411(+) A-I      intronic chr19:41236064(+) A-I      intronic chr19:41236051(+) A-I      intronic chr19:41236022(+) A-I      intronic chr19:41235690(+) A-I      intronic chr19:41235628(+) A-I      intronic chr19:41235565(+) A-I      intronic chr19:41225580(+) A-I      intronic chr19:41225584(+) A-I      intronic chr19:41226152(+) A-I      intronic chr19:41226880(+) A-I      intronic chr19:41226914(+) A-I      intronic chr19:41226915(+) A-I      intronic chr19:41226919(+) A-I      intronic chr19:41226932(+) A-I      intronic chr19:41227376(+) A-I      intronic chr19:41227401(+) A-I      intronic chr19:41227526(+) A-I      intronic chr19:41227535(+) A-I      intronic chr19:41227627(+) A-I      intronic chr19:41227649(+) A-I      intronic chr19:41227723(+) A-I      intronic chr19:41227807(+) A-I      intronic chr19:41227808(+) A-I      intronic chr19:41228931(+) A-I      intronic chr19:41227809(+) A-I      intronic chr19:41227838(+) A-I      intronic chr19:41227855(+) A-I      intronic chr19:41227856(+) A-I      intronic chr19:41227861(+) A-I      intronic chr19:41228743(+) A-I      intronic chr19:41228745(+) A-I      intronic chr19:41229073(+) A-I      intronic chr19:41229281(+) A-I      intronic chr19:41229282(+) A-I      intronic chr19:41230110(+) A-I      intronic chr19:41230678(+) A-I      intronic chr19:41230689(+) A-I      intronic chr19:41230707(+) A-I      intronic chr19:41230711(+) A-I      intronic chr19:41235519(+) A-I      intronic chr19:41235509(+) A-I      intronic chr19:41235506(+) A-I      intronic chr19:41235494(+) A-I      intronic chr19:41230864(+) A-I      intronic chr19:41230828(+) A-I      intronic chr19:41230713(+) A-I      intronic chr19:41242644(+) A-I      intronic chr19:41242607(+) A-I      intronic chr19:41242548(+) A-I      intronic chr19:41242538(+) A-I      intronic chr19:41242145(+) A-I      intronic chr19:41242097(+) A-I      intronic chr19:41244382(+) A-I      intronic chr19:41225648(+) A-I      intronic chr19:41227826(+) A-I      intronic chr19:41235511(+) A-I      intronic chr19:41240962(+) A-I      intronic chr19:41236192(+) A-I      intronic chr19:41235932(+) A-I      intronic chr19:41242039(+) A-I      intronic chr19:41226161(+) A-I      intronic chr19:41230759(+) A-I      intronic chr19:41227551(+) A-I      intronic chr19:41232714(+) A-I      intronic chr19:41236387(+) A-I      intronic chr19:41242035(+) A-I      intronic chr19:41242049(+) A-I      intronic chr19:41236105(+) A-I      intronic chr19:41233745(+) A-I      intronic chr19:41236406(+) A-I      intronic chr19:41228732(+) A-I      intronic chr19:41230079(+) A-I      intronic chr19:41242043(+) A-I      intronic chr19:41227457(+) A-I      intronic chr19:41238011(+) A-I      intronic chr19:41235552(+) A-I      intronic chr19:41242675(+) A-I      intronic chr19:41235617(+) A-I      intronic chr19:41227550(+) A-I      intronic chr19:41238077(+) A-I      intronic chr19:41230743(+) A-I      intronic chr19:41238281(+) A-I      intronic chr19:41242140(+) A-I      intronic chr19:41238035(+) A-I      intronic chr19:41238611(+) A-I      intronic chr19:41230188(+) A-I      intronic chr19:41227719(+) A-I      intronic chr19:41230055(+) A-I      intronic chr19:41235471(+) A-I      intronic chr19:41235624(+) A-I      intronic chr19:41236631(+) A-I      intronic chr19:41235593(+) A-I      intronic chr19:41227454(+) A-I      intronic chr19:41237607(+) A-I      intronic chr19:41228799(+) A-I      intronic chr19:41236198(+) A-I      intronic chr19:41240614(+) A-I      intronic chr19:41240653(+) A-I      intronic chr19:41242120(+) A-I      intronic chr19:41235946(+) A-I      intronic chr19:41225494(+) A-I      intronic chr19:41225631(+) A-I      intronic chr19:41241942(+) A-I      intronic chr19:41230605(+) A-I      intronic chr19:41238086(+) A-I      intronic chr19:41242034(+) A-I      intronic chr19:41244496(+) A-I      intronic chr19:41235975(+) A-I      intronic chr19:41235981(+) A-I      intronic chr19:41225495(+) A-I      intronic chr19:41236454(+) A-I      intronic chr19:41238095(+) A-I      intronic chr19:41241964(+) A-I      intronic chr19:41225578(+) A-I      intronic chr19:41227545(+) A-I      intronic chr19:41242645(+) A-I      intronic chr19:41230244(+) A-I      intronic chr19:41227746(+) A-I      intronic chr19:41228794(+) A-I      intronic chr19:41241950(+) A-I      intronic chr19:41238094(+) A-I      intronic chr19:41225569(+) A-I      intronic chr19:41237963(+) A-I      intronic chr19:41230086(+) A-I      intronic chr19:41236570(+) A-I      intronic chr19:41242460(+) A-I      intronic chr19:41240787(+) A-I      intronic chr19:41242639(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ITPKC	chr19:41223025-41223026(+) m6A 5'UTR       24209618 chr19:41223114-41223115(+) m6A CDS       24209618//25456834//24981863 chr19:41223153-41223154(+) m6A CDS       24209618//24981863 chr19:41223223-41223224(+) m6A CDS       24284625//24209618//25456834//24981863//22608085 chr19:41223283-41223284(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr19:41223310-41223311(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr19:41223318-41223319(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr19:41223355-41223356(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr19:41223386-41223387(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr19:41223457-41223458(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr19:41223463-41223464(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr19:41223478-41223479(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr19:41223532-41223533(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr19:41223559-41223560(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr19:41223586-41223587(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr19:41223628-41223629(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr19:41223638-41223639(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr19:41223655-41223656(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr19:41223736-41223737(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr19:41223763-41223764(+) m6A CDS       24284625//25456834//24981863//26404942//22575960//22608085 chr19:41223795-41223796(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr19:41223819-41223820(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr19:41223871-41223872(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr19:41223898-41223899(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr19:41223910-41223911(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr19:41223954-41223955(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr19:41224045-41224046(+) m6A CDS       24284625//25456834//24981863//22608085 chr19:41224074-41224075(+) m6A CDS       24284625//25456834//24981863//22608085 chr19:41224184-41224185(+) m6A CDS       24284625 chr19:41231249-41231250(+) m6A CDS       24284625 chr19:41231268-41231269(+) m6A CDS       24284625 chr19:41235265-41235266(+) m6A CDS       - chr19:41235301-41235302(+) m6A CDS       24981863 chr19:41239120-41239121(+) m6A CDS//intron       24284625 chr19:41239147-41239148(+) m6A CDS//intron       24284625 chr19:41239221-41239222(+) m6A CDS//intron       - chr19:41243665-41243666(+) m6A 3'UTR//CDS       24284625 chr19:41245325-41245326(+) m6A 3'UTR//CDS       24284625//25456834//24981863 chr19:41245424-41245425(+) m6A 3'UTR//CDS       24284625//25456834//24981863//22608085 chr19:41245603-41245604(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr19:41245636-41245637(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr19:41245679-41245680(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr19:41245716-41245717(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr19:41245819-41245820(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr19:41245885-41245886(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr19:41245935-41245936(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr19:41245955-41245956(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr19:41246045-41246046(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr19:41246129-41246130(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr19:41246149-41246150(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr19:41246155-41246156(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr19:41246232-41246233(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr19:41246283-41246284(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr19:41246444-41246445(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr19:41246468-41246469(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr19:41246475-41246476(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr19:41246483-41246484(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr19:41246557-41246558(+) m6A 3'UTR       24284625//24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ITPKC	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Insoluble cytoplasm HCC cell line (HepG2)     - Nucleolus K562 cells     - Nucleoplasm K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: mcpv-miR-P1-5p
Interactor2: ITPKC

Evidence Support:

Prediction-Evidence	cRep//Targetscan
Support Database	RepTar//VmiReg